Difference between revisions of "RXN-11319"

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(Created page with "Category:reaction == Reaction RXN-10625 == * direction: ** left-to-right * common-name: ** geranylgeranyl diphosphate reductase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction RXN-11319 == * direction: ** left-to-right * common-name: ** 2-iminoacetate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.99.19 e...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10625 ==
+
== Reaction RXN-11319 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** geranylgeranyl diphosphate reductase
+
** 2-iminoacetate synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.83 ec-1.3.1.83]
+
** [http://enzyme.expasy.org/EC/4.1.99.19 ec-4.1.99.19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GERANYLGERANYL-PP]][c] '''+''' 3 [[NADPH]][c] '''+''' 3 [[PROTON]][c] '''=>''' 3 [[NADP]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[CH33ADO]][c] '''+''' 1 [[CPD-108]][c] '''+''' 1 [[CPD-12279]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15264]]
+
* Gene: [[SJ17412]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6892]], thiazole component of thiamine diphosphate biosynthesis I:
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR104993
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10246 R10246]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26229 26229]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26364 26364]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02063 R02063]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=geranylgeranyl diphosphate reductase}}
+
{{#set: common-name=2-iminoacetate synthase}}
−
{{#set: ec-number=ec-1.3.1.83}}
+
{{#set: ec-number=ec-4.1.99.19}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-11319

  • direction:
    • left-to-right
  • common-name:
    • 2-iminoacetate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6892, thiazole component of thiamine diphosphate biosynthesis I:
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR104993
  • LIGAND-RXN:
  • RHEA:





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