Difference between revisions of "RXN-11478"

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(Created page with "Category:reaction == Reaction OXALODECARB-RXN == * direction: ** left-to-right * common-name: ** malate dehydrogenase (decarboxylating) (nad+) ** oxaloacetate decarboxylas...")
(Created page with "Category:reaction == Reaction RXN-11478 == * direction: ** left-to-right * common-name: ** enoylglutaryl-[acp] methyl ester reductase * ec-number: ** [http://enzyme.expasy...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction OXALODECARB-RXN ==
+
== Reaction RXN-11478 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** malate dehydrogenase (decarboxylating) (nad+)
+
** enoylglutaryl-[acp] methyl ester reductase
** oxaloacetate decarboxylase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.40 ec-1.1.1.40]
+
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
** [http://enzyme.expasy.org/EC/4.1.1.3 ec-4.1.1.3]
 
** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[Enoylglutaryl-ACP-methyl-esters]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Glutaryl-ACP-methyl-esters]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ11643]]
+
* Gene: [[SJ03883]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ14191]]
+
* Gene: [[SJ00320]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ13180]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway):
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
* [[PWY-6339]], syringate degradation:
 
** '''2''' reactions found over '''9''' reactions in the full pathway
 
* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation:
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR116969
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15642 15642]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00217 R00217]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P13187 P13187]
 
** [http://www.uniprot.org/uniprot/P13155 P13155]
 
** [http://www.uniprot.org/uniprot/P13156 P13156]
 
** [http://www.uniprot.org/uniprot/Q58628 Q58628]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=malate dehydrogenase (decarboxylating) (nad+)|oxaloacetate decarboxylase}}
+
{{#set: common-name=enoylglutaryl-[acp] methyl ester reductase}}
{{#set: ec-number=ec-1.1.1.40|ec-1.1.1.38|ec-4.1.1.3}}
+
{{#set: ec-number=ec-1.3.1.9}}
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-11478

  • direction:
    • left-to-right
  • common-name:
    • enoylglutaryl-[acp] methyl ester reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I:
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR116969

Property "Common-name" (as page type) with input value "enoylglutaryl-[acp] methyl ester reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.