Difference between revisions of "RXN-11479"

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(Created page with "Category:reaction == Reaction RXN-14160 == * direction: ** left-to-right * common-name: ** glycerophosphorylethanolamine phosphodiesterase ** l-1-glycerophophorylethanolam...")
(Created page with "Category:reaction == Reaction RXN-11479 == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expasy....")
 
(2 intermediate revisions by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-14160 ==
+
== Reaction RXN-11479 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** glycerophosphorylethanolamine phosphodiesterase
+
** 3-oxoacyl-[acyl-carrier-protein] synthase
** l-1-glycerophophorylethanolamine phosphodiesterase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
** [http://enzyme.expasy.org/EC/3.1.4.2 ec-3.1.4.2]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ETHANOL-AMINE]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Glutaryl-ACP-methyl-esters]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16458]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ04443]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ00999]]
+
* Gene: [[SJ06617]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10624]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15983]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18059]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00005]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15984]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast):
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
* LIGAND-RXN:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29320 29320]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10119 R10119]
 +
* METANETX-RXN : MNXR113492
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=glycerophosphorylethanolamine phosphodiesterase|l-1-glycerophophorylethanolamine phosphodiesterase}}
+
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase}}
{{#set: ec-number=ec-3.1.4.46|ec-3.1.4.2}}
+
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}}
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=7}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-11479

  • direction:
    • left-to-right
  • common-name:
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I:
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR113492

Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.