Difference between revisions of "RXN-11681"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-8025 == * direction: ** left-to-right * synonymous: ** β-carotene 3,3′-monooxygenase ** crtz == Reaction formula == * 1 CPD1...")
(Created page with "Category:reaction == Reaction TransportSeed-FE+2 == * direction: ** left-to-right == Reaction formula == * 1.0 FE+2[e] '''=>''' 1.0 FE+2[c] == Gene(s) associated w...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-8025 ==
+
== Reaction TransportSeed-FE+2 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* synonymous:
 
** β-carotene 3,3′-monooxygenase
 
** crtz
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD1F-129]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD-7409]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
+
* 1.0 [[FE+2]][e] '''=>''' 1.0 [[FE+2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07227]]
 
** Category: [[manual]]
 
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
* Gene: [[SJ07228]]
 
** Category: [[manual]]
 
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis):
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5944]], zeaxanthin biosynthesis:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae):
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07558 R07558]
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30326 30326]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: synonymous=crtz|β-carotene 3,3′-monooxygenase}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)}}
+
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction source=sjap}}
+
{{#set: reconstruction source=import_from_medium}}

Revision as of 08:37, 15 March 2021

Reaction TransportSeed-FE+2

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links