Difference between revisions of "RXN-11837"

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(Created page with "Category:reaction == Reaction RXN0-4222 == * direction: ** left-to-right * common-name: ** rnase bn exoribonuclease * ec-number: ** [http://enzyme.expasy.org/EC/3.1.13.1 e...")
(Created page with "Category:reaction == Reaction RXN-11837 == * direction: ** left-to-right * common-name: ** 23s rrna pseudouridine1911/1915/1917 synthase * ec-number: ** [http://enzyme.exp...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-4222 ==
+
== Reaction RXN-11837 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** rnase bn exoribonuclease
+
** 23s rrna pseudouridine1911/1915/1917 synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.13.1 ec-3.1.13.1]
+
** [http://enzyme.expasy.org/EC/5.4.99.23 ec-5.4.99.23]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD0-2351]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2354]][c] '''+''' 1 [[Ribonucleoside-Monophosphates]][c]
+
* 1 [[23S-rRNA-uridine1911-1915-1917]][c] '''=>''' 1 [[23S-rRNA-pseudouridine1911-1915-1917]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19616]]
+
* Gene: [[SJ04758]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22218]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19688]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1479]], tRNA processing:
 
** '''4''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR123178
+
* METANETX-RXN : MNXR117184
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42525 42525]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=rnase bn exoribonuclease}}
+
{{#set: common-name=23s rrna pseudouridine1911/1915/1917 synthase}}
{{#set: ec-number=ec-3.1.13.1}}
+
{{#set: ec-number=ec-5.4.99.23}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-11837

  • direction:
    • left-to-right
  • common-name:
    • 23s rrna pseudouridine1911/1915/1917 synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117184
  • RHEA: