Difference between revisions of "RXN-11842"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN == * direction: ** left-to-right * common-name: ** 2-amino-3-carboxymuconate-6-semialdehyde decarboxyl...")
(Created page with "Category:reaction == Reaction RXN-11842 == * direction: ** left-to-right * common-name: ** trna pseudouridine32 synthase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.9...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN ==
+
== Reaction RXN-11842 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
+
** trna pseudouridine32 synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.1.45 ec-4.1.1.45]
+
** [http://enzyme.expasy.org/EC/5.4.99.28 ec-5.4.99.28]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[2-AMINOMUCONATE_SEMIALDEHYDE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[Uridine32-in-tRNA]][c] '''=>''' 1 [[tRNA-pseudouridine32]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ02880]]
+
* Gene: [[SJ18426]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19705]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5654]], 2-amino-3-carboxymuconate semialdehyde degradation to 2-hydroxypentadienoate:
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5652]], 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA:
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5647]], 2-nitrobenzoate degradation I:
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR117189
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16558 16558]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42545 42545]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04323 R04323]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=2-amino-3-carboxymuconate-6-semialdehyde decarboxylase}}
+
{{#set: common-name=trna pseudouridine32 synthase}}
{{#set: ec-number=ec-4.1.1.45}}
+
{{#set: ec-number=ec-5.4.99.28}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-11842

  • direction:
    • left-to-right
  • common-name:
    • trna pseudouridine32 synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117189
  • RHEA: