Difference between revisions of "RXN-11963"

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(Created page with "Category:reaction == Reaction ALLANTOICASE-RXN == * direction: ** left-to-right * common-name: ** allantoicase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.3.4 ec-3.5....")
(Created page with "Category:reaction == Reaction RXN-11963 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.87 ec-2.5.1.87] == Reaction formula == * n DELTA...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction ALLANTOICASE-RXN ==
+
== Reaction RXN-11963 ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** allantoicase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.3.4 ec-3.5.3.4]
+
** [http://enzyme.expasy.org/EC/2.5.1.87 ec-2.5.1.87]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ALLANTOATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1091]][c] '''+''' 1 [[UREA]][c]
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* n [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''<=>''' 1 [[Di-trans-poly-cis-polyprenyl-PP]][c] '''+''' n [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11493]]
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* Gene: [[SJ18388]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing):
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
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* METANETX-RXN : MNXR117261
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11017 11017]
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{{#set: direction=reversible}}
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* LIGAND-RXN:
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{{#set: ec-number=ec-2.5.1.87}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02422 R02422]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P18407 P18407]
 
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** [http://www.uniprot.org/uniprot/P25335 P25335]
 
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** [http://www.uniprot.org/uniprot/Q09913 Q09913]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=allantoicase}}
 
−
{{#set: ec-number=ec-3.5.3.4}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-11963

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117261





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