Difference between revisions of "RXN-11963"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-16049 == * direction: ** left-to-right * common-name: ** (7z,10z)-hexadecadienoyl-lipid 13-desaturase * ec-number: ** [http://enzyme.expa...") |
(Created page with "Category:reaction == Reaction ALLANTOICASE-RXN == * direction: ** left-to-right * common-name: ** allantoicase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.3.4 ec-3.5....") |
||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction ALLANTOICASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** allantoicase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.5.3.4 ec-3.5.3.4] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[ALLANTOATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1091]][c] '''+''' 1 [[UREA]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ11493]] |
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing): |
| − | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11017 11017] |
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02422 R02422] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P18407 P18407] | ||
| + | ** [http://www.uniprot.org/uniprot/P25335 P25335] | ||
| + | ** [http://www.uniprot.org/uniprot/Q09913 Q09913] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=allantoicase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-3.5.3.4}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:02, 5 January 2021
Contents
Reaction ALLANTOICASE-RXN
- direction:
- left-to-right
- common-name:
- allantoicase
- ec-number:
Reaction formula
- 1 ALLANTOATE[c] + 1 WATER[c] => 1 CPD-1091[c] + 1 UREA[c]
Gene(s) associated with this reaction
- Gene: SJ11493
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5697, allantoin degradation to ureidoglycolate I (urea producing):
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
