Difference between revisions of "RXN-12160"

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(Created page with "Category:reaction == Reaction RXN-8330 == * direction: ** left-to-right * common-name: ** 1-18:3-2-18:1-phosphatidylcholine 2-12-desaturase * ec-number: ** [http://enzyme....")
(Created page with "Category:reaction == Reaction HISTPRATPHYD-RXN == * direction: ** left-to-right * common-name: ** phosphoribosyl-atp pyrophosphatase * ec-number: ** [http://enzyme.expasy....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8330 ==
+
== Reaction HISTPRATPHYD-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 1-18:3-2-18:1-phosphatidylcholine 2-12-desaturase
+
** phosphoribosyl-atp pyrophosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.19.22 ec-1.14.19.22]
+
** [http://enzyme.expasy.org/EC/3.6.1.31 ec-3.6.1.31]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-8089]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-8090]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00667]]
+
* Gene: [[SJ07444]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-762]], phospholipid desaturation:
+
* [[HISTSYN-PWY]], L-histidine biosynthesis:
−
** '''19''' reactions found over '''21''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22829 22829]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P44434 P44434]
 +
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
 +
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
 +
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
 +
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
 +
** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
 +
** [http://www.uniprot.org/uniprot/O34912 O34912]
 +
** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
 +
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
 +
** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
 +
** [http://www.uniprot.org/uniprot/Q57750 Q57750]
 +
** [http://www.uniprot.org/uniprot/O27344 O27344]
 +
** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
 +
** [http://www.uniprot.org/uniprot/O67780 O67780]
 +
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
 +
** [http://www.uniprot.org/uniprot/P26722 P26722]
 +
** [http://www.uniprot.org/uniprot/P45353 P45353]
 +
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 +
** [http://www.uniprot.org/uniprot/P50935 P50935]
 +
** [http://www.uniprot.org/uniprot/P00815 P00815]
 +
** [http://www.uniprot.org/uniprot/P07685 P07685]
 +
** [http://www.uniprot.org/uniprot/O59667 O59667]
 +
** [http://www.uniprot.org/uniprot/O82768 O82768]
 +
** [http://www.uniprot.org/uniprot/P10367 P10367]
 +
** [http://www.uniprot.org/uniprot/P06989 P06989]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-18:3-2-18:1-phosphatidylcholine 2-12-desaturase}}
+
{{#set: common-name=phosphoribosyl-atp pyrophosphatase}}
−
{{#set: ec-number=ec-1.14.19.22}}
+
{{#set: ec-number=ec-3.6.1.31}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:38, 5 January 2021

Reaction HISTPRATPHYD-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphoribosyl-atp pyrophosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISTSYN-PWY, L-histidine biosynthesis:
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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