Difference between revisions of "RXN-12198"

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(Created page with "Category:reaction == Reaction RXN-8675 == * direction: ** left-to-right * common-name: ** s-adenosyl-l-methionine:precorrin-1 c-methyltransferase * synonymous: ** uroporph...")
(Created page with "Category:reaction == Reaction RXN-14937 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.30 ec-3.1.2.30] == Reaction formula == * 1 CP...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8675 ==
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== Reaction RXN-14937 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
+
* ec-number:
−
** s-adenosyl-l-methionine:precorrin-1 c-methyltransferase
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** [http://enzyme.expasy.org/EC/3.1.2.30 ec-3.1.2.30]
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* synonymous:
 
−
** uroporphyrinogen methyltransferase
 
−
** uroporphyrinogen-iii methyltransferase
 
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** s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase
 
−
** sira
 
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** adenosylmethionine-uroporphyrinogen iii methyltransferase
 
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** s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)
 
−
** uroporphyrin-iii c-methyltransferase (incorrect)
 
−
** cysg
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-9038]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIHYDROSIROHYDROCHLORIN]][c]
+
* 1 [[CPD-208]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MAL]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12313]]
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* Gene: [[SJ03889]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation):
+
* [[PWY-6728]], methylaspartate cycle:
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** '''2''' reactions found over '''13''' reactions in the full pathway
+
** '''11''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
 
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** '''4''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5196]], factor 430 biosynthesis:
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5194]], siroheme biosynthesis:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21973 21973]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=38292 38292]
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R07238 R07238]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=s-adenosyl-l-methionine:precorrin-1 c-methyltransferase}}
+
{{#set: ec-number=ec-3.1.2.30}}
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{{#set: synonymous=uroporphyrinogen methyltransferase|uroporphyrin-iii c-methyltransferase (incorrect)|uroporphyrinogen-iii methyltransferase|s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase|cysg|sira|adenosylmethionine-uroporphyrinogen iii methyltransferase|s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:33, 5 January 2021

Reaction RXN-14937

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6728, methylaspartate cycle:
    • 11 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





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