Difference between revisions of "RXN-12413"

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(Created page with "Category:reaction == Reaction RXN-13297 == * direction: ** left-to-right * common-name: ** 3-oxo-lignoceronyl-coa synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.3...")
(Created page with "Category:reaction == Reaction RXN-12413 == * direction: ** left-to-right * common-name: ** phytoene desaturase (3,4-didehydrolycopene-forming) * ec-number: ** [http://enzy...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-13297 ==
+
== Reaction RXN-12413 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3-oxo-lignoceronyl-coa synthase
+
** phytoene desaturase (3,4-didehydrolycopene-forming)
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1.199 ec-2.3.1.199]
+
** [http://enzyme.expasy.org/EC/1.3.99.30 ec-1.3.99.30]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-10279]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14273]][c]
+
* 5 [[Acceptor]][c] '''+''' 1 [[CPD-12321]][c] '''=>''' 1 [[CPD-12932]][c] '''+''' 5 [[Donor-H2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ11672]]
+
* Gene: [[SJ18358]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ06616]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ19629]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00613]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7036]], very long chain fatty acid biosynthesis II:
 
** '''14''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR117535
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R09703 R09703]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30978 30978]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-oxo-lignoceronyl-coa synthase}}
+
{{#set: common-name=phytoene desaturase (3,4-didehydrolycopene-forming)}}
{{#set: ec-number=ec-2.3.1.199}}
+
{{#set: ec-number=ec-1.3.99.30}}
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-12413

  • direction:
    • left-to-right
  • common-name:
    • phytoene desaturase (3,4-didehydrolycopene-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117535
  • LIGAND-RXN:
  • RHEA: