Difference between revisions of "RXN-12729"
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(Created page with "Category:reaction == Reaction RXN-7658 == * direction: ** reversible * common-name: ** geranylgeranyl diphosphate reductase == Reaction formula == * 1 CPD-7002[c] '''+...") |
(Created page with "Category:reaction == Reaction 4.2.3.12-RXN == * direction: ** left-to-right * common-name: ** 6-pyruvoyl-tetrahydropterin synthase * ec-number: ** [http://enzyme.expasy.or...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction 4.2.3.12-RXN == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** 6-pyruvoyl-tetrahydropterin synthase |
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.2.3.12 ec-4.2.3.12] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[DIHYDRONEOPTERIN-P3]][c] '''=>''' 1 [[6-PYRUVOYL-5678-TETRAHYDROPTERIN]][c] '''+''' 1 [[P3I]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ00075]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ00496]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis: |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
| + | * [[PWY-5663]], erythro-tetrahydrobiopterin biosynthesis I: | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5664]], erythro-tetrahydrobiopterin biosynthesis II: | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6983]], threo-tetrahydrobiopterin biosynthesis: | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22049 22049] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04286 R04286] |
| − | {{#set: direction= | + | {{#set: direction=left-to-right}} |
| − | {{#set: common-name= | + | {{#set: common-name=6-pyruvoyl-tetrahydropterin synthase}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-4.2.3.12}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=2}} |
| + | {{#set: nb pathway associated=4}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | ||
Revision as of 19:07, 14 January 2021
Contents
Reaction 4.2.3.12-RXN
- direction:
- left-to-right
- common-name:
- 6-pyruvoyl-tetrahydropterin synthase
- ec-number:
Reaction formula
- 1 DIHYDRONEOPTERIN-P3[c] => 1 6-PYRUVOYL-5678-TETRAHYDROPTERIN[c] + 1 P3I[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ00075
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ00496
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-7442, drosopterin and aurodrosopterin biosynthesis:
- 3 reactions found over 7 reactions in the full pathway
- PWY-5663, erythro-tetrahydrobiopterin biosynthesis I:
- 3 reactions found over 4 reactions in the full pathway
- PWY-5664, erythro-tetrahydrobiopterin biosynthesis II:
- 2 reactions found over 4 reactions in the full pathway
- PWY-6983, threo-tetrahydrobiopterin biosynthesis:
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
