Difference between revisions of "RXN-12895"

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(Created page with "Category:reaction == Reaction RXN-13414 == * direction: ** left-to-right == Reaction formula == * 1 NAD[c] '''+''' 1 SPERMIDINE[c] '''=>''' 1 CPD-14378[c] '''+...")
(Created page with "Category:reaction == Reaction ALPHAGALACTOSID-RXN == * direction: ** left-to-right * common-name: ** alpha-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13414 ==
+
== Reaction ALPHAGALACTOSID-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** alpha-galactosidase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[SPERMIDINE]][c] '''=>''' 1 [[CPD-14378]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[MELIBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09995]]
+
* Gene: [[SJ03511]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02145]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02144]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05258]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5905]], hypusine biosynthesis:
+
* [[PWY0-1301]], melibiose degradation:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07477 R07477]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19908 19908]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P16551 P16551]
 +
** [http://www.uniprot.org/uniprot/P27756 P27756]
 +
** [http://www.uniprot.org/uniprot/P04824 P04824]
 +
** [http://www.uniprot.org/uniprot/P06720 P06720]
 +
** [http://www.uniprot.org/uniprot/P06280 P06280]
 +
** [http://www.uniprot.org/uniprot/P51569 P51569]
 +
** [http://www.uniprot.org/uniprot/O93816 O93816]
 +
** [http://www.uniprot.org/uniprot/Q03647 Q03647]
 +
** [http://www.uniprot.org/uniprot/P14749 P14749]
 +
** [http://www.uniprot.org/uniprot/P28351 P28351]
 +
** [http://www.uniprot.org/uniprot/P43467 P43467]
 +
** [http://www.uniprot.org/uniprot/Q99172 Q99172]
 +
** [http://www.uniprot.org/uniprot/P41945 P41945]
 +
** [http://www.uniprot.org/uniprot/P41946 P41946]
 +
** [http://www.uniprot.org/uniprot/P41947 P41947]
 +
** [http://www.uniprot.org/uniprot/Q92457 Q92457]
 +
** [http://www.uniprot.org/uniprot/Q92456 Q92456]
 +
** [http://www.uniprot.org/uniprot/Q92451 Q92451]
 +
** [http://www.uniprot.org/uniprot/O04943 O04943]
 +
** [http://www.uniprot.org/uniprot/O04944 O04944]
 +
** [http://www.uniprot.org/uniprot/Q39811 Q39811]
 +
** [http://www.uniprot.org/uniprot/Q41100 Q41100]
 +
** [http://www.uniprot.org/uniprot/Q42656 Q42656]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=alpha-galactosidase}}
 +
{{#set: ec-number=ec-3.2.1.22}}
 +
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:08, 5 January 2021

Reaction ALPHAGALACTOSID-RXN

  • direction:
    • left-to-right
  • common-name:
    • alpha-galactosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1301, melibiose degradation:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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