Difference between revisions of "RXN-13112"

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(Created page with "Category:reaction == Reaction METHYLVALERATE-RXN == * direction: ** reversible * common-name: ** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)...")
(Created page with "Category:reaction == Reaction RXN-13112 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.198 ec-2.3.1.198] == Reaction formula == * 1 ACY...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction METHYLVALERATE-RXN ==
+
== Reaction RXN-13112 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
* common-name:
 
** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
+
** [http://enzyme.expasy.org/EC/2.3.1.198 ec-2.3.1.198]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[ACYL-COA]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''<=>''' 1 [[2-Acyl-sn-glycerol-3-phosphates]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18449]]
+
* Gene: [[SJ15041]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ11017]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR110603
* UNIPROT:
+
* LIGAND-RXN:
** [http://www.uniprot.org/uniprot/P21839 P21839]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06872 R06872]
** [http://www.uniprot.org/uniprot/P21953 P21953]
+
* RHEA:
** [http://www.uniprot.org/uniprot/P37940 P37940]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33562 33562]
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
 
** [http://www.uniprot.org/uniprot/P37941 P37941]
 
** [http://www.uniprot.org/uniprot/P11178 P11178]
 
** [http://www.uniprot.org/uniprot/P12694 P12694]
 
** [http://www.uniprot.org/uniprot/P09061 P09061]
 
** [http://www.uniprot.org/uniprot/P09060 P09060]
 
** [http://www.uniprot.org/uniprot/P11960 P11960]
 
** [http://www.uniprot.org/uniprot/O84344 O84344]
 
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 
** [http://www.uniprot.org/uniprot/P35738 P35738]
 
** [http://www.uniprot.org/uniprot/P50136 P50136]
 
** [http://www.uniprot.org/uniprot/O48615 O48615]
 
** [http://www.uniprot.org/uniprot/O03849 O03849]
 
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 
** [http://www.uniprot.org/uniprot/O82450 O82450]
 
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)}}
+
{{#set: ec-number=ec-2.3.1.198}}
{{#set: ec-number=ec-1.2.4.4}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-13112

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR110603
  • LIGAND-RXN:
  • RHEA: