Difference between revisions of "RXN-13112"

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(Created page with "Category:reaction == Reaction METHYLVALERATE-RXN == * direction: ** reversible * common-name: ** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)...")
(Created page with "Category:reaction == Reaction RXN-9191 == * direction: ** left-to-right * common-name: ** s-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase * ec-number: ** [ht...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction METHYLVALERATE-RXN ==
+
== Reaction RXN-9191 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)
+
** s-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
+
** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[CPD-12117]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-12125]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18449]]
+
* Gene: [[SJ07072]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ20751]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ11017]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02693]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11757]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00609]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02842]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5839]], menaquinol-7 biosynthesis:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* RHEA:
−
* UNIPROT:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33256 33256]
−
** [http://www.uniprot.org/uniprot/P21839 P21839]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P21953 P21953]
+
{{#set: common-name=s-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase}}
−
** [http://www.uniprot.org/uniprot/P37940 P37940]
+
{{#set: ec-number=ec-2.1.1.163}}
−
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
+
{{#set: nb gene associated=6}}
−
** [http://www.uniprot.org/uniprot/P37941 P37941]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P11178 P11178]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P12694 P12694]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P09061 P09061]
 
−
** [http://www.uniprot.org/uniprot/P09060 P09060]
 
−
** [http://www.uniprot.org/uniprot/P11960 P11960]
 
−
** [http://www.uniprot.org/uniprot/O84344 O84344]
 
−
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 
−
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 
−
** [http://www.uniprot.org/uniprot/P35738 P35738]
 
−
** [http://www.uniprot.org/uniprot/P50136 P50136]
 
−
** [http://www.uniprot.org/uniprot/O48615 O48615]
 
−
** [http://www.uniprot.org/uniprot/O03849 O03849]
 
−
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 
−
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 
−
** [http://www.uniprot.org/uniprot/O82450 O82450]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)}}
 
−
{{#set: ec-number=ec-1.2.4.4}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:38, 5 January 2021

Reaction RXN-9191

  • direction:
    • left-to-right
  • common-name:
    • s-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5839, menaquinol-7 biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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