Difference between revisions of "RXN-13162"

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(Created page with "Category:reaction == Reaction RXN-9242 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201] == Reaction formula == * 1 C...")
(Created page with "Category:reaction == Reaction RXN-9386 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.24 ec-6.1.1.24] == Reaction formula == * 1 ATP...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9242 ==
+
== Reaction RXN-9386 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
+
** [http://enzyme.expasy.org/EC/6.1.1.24 ec-6.1.1.24]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-9870]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9872]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GLN-tRNAs]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-glutamyl-tRNAGln]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ12903]]
* Gene: [[SJ02693]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* Gene: [[SJ07890]]
* Gene: [[SJ11297]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20751]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02842]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00609]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ11757]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07072]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5856]], ubiquinol-9 biosynthesis (prokaryotic):
+
* [[PWY-5921]], glutaminyl-tRNAgln biosynthesis via transamidation:
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[PWY-5871]], ubiquinol-9 biosynthesis (eukaryotic):
 
** '''3''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
* LIGAND-RXN:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44761 44761]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03651 R03651]
 +
* METANETX-RXN : MNXR100296
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.1.1.201}}
+
{{#set: ec-number=ec-6.1.1.24}}
{{#set: nb gene associated=7}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 08:37, 15 March 2021

Reaction RXN-9386

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5921, glutaminyl-tRNAgln biosynthesis via transamidation:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR100296