Difference between revisions of "RXN-13435"

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(Created page with "Category:reaction == Reaction 3-OXOACYL-ACP-SYNTH-RXN == * direction: ** left-to-right * common-name: ** fatty acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/2...")
(Created page with "Category:reaction == Reaction RXN-13435 == * direction: ** left-to-right * common-name: ** palmitoyl-coa hydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.2 ec-...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 3-OXOACYL-ACP-SYNTH-RXN ==
+
== Reaction RXN-13435 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** fatty acid synthase
+
** palmitoyl-coa hydrolase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
+
** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3.1.2.2]
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[CPD-14407]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-8120]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ09703]]
* Gene: [[SJ06617]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[SJ04443]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ06944]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ00320]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ04769]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ06616]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ19629]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ15983]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ17743]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ18059]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ00613]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ13014]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ10624]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ11672]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ03883]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ00005]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ15984]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* LIGAND-RXN:
* METANETX-RXN : MNXR115237
+
** [http://www.genome.jp/dbget-bin/www_bget?R08182 R08182]
* UNIPROT:
+
* METANETX-RXN : MNXR111754
** [http://www.uniprot.org/uniprot/P23902 P23902]
 
** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
 
** [http://www.uniprot.org/uniprot/P49327 P49327]
 
** [http://www.uniprot.org/uniprot/P43710 P43710]
 
** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
 
** [http://www.uniprot.org/uniprot/O67612 O67612]
 
** [http://www.uniprot.org/uniprot/P20582 P20582]
 
** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
 
** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
 
** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
 
** [http://www.uniprot.org/uniprot/P43711 P43711]
 
** [http://www.uniprot.org/uniprot/O25284 O25284]
 
** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
 
** [http://www.uniprot.org/uniprot/O34340 O34340]
 
** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
 
** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
 
** [http://www.uniprot.org/uniprot/Q07510 Q07510]
 
** [http://www.uniprot.org/uniprot/Q06097 Q06097]
 
** [http://www.uniprot.org/uniprot/P41175 P41175]
 
** [http://www.uniprot.org/uniprot/P31176 P31176]
 
** [http://www.uniprot.org/uniprot/Q40027 Q40027]
 
** [http://www.uniprot.org/uniprot/Q40028 Q40028]
 
** [http://www.uniprot.org/uniprot/P73283 P73283]
 
** [http://www.uniprot.org/uniprot/P0A953 P0A953]
 
** [http://www.uniprot.org/uniprot/O64485 O64485]
 
** [http://www.uniprot.org/uniprot/O65677 O65677]
 
** [http://www.uniprot.org/uniprot/Q39310 Q39310]
 
** [http://www.uniprot.org/uniprot/O23738 O23738]
 
** [http://www.uniprot.org/uniprot/Q41134 Q41134]
 
** [http://www.uniprot.org/uniprot/Q41135 Q41135]
 
** [http://www.uniprot.org/uniprot/Q54208 Q54208]
 
** [http://www.uniprot.org/uniprot/O54440 O54440]
 
** [http://www.uniprot.org/uniprot/P55338 P55338]
 
** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
 
** [http://www.uniprot.org/uniprot/P12276 P12276]
 
** [http://www.uniprot.org/uniprot/P12785 P12785]
 
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=fatty acid synthase}}
+
{{#set: common-name=palmitoyl-coa hydrolase}}
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179|ec-2.3.1.85|ec-2.3.1.86}}
+
{{#set: ec-number=ec-3.1.2.2}}
{{#set: nb gene associated=17}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-13435

  • direction:
    • left-to-right
  • common-name:
    • palmitoyl-coa hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR111754