Difference between revisions of "RXN-13698"

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(Created page with "Category:reaction == Reaction HOLOCYTOCHROME-C-SYNTHASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.4.1.17 ec-4.4.1.17] == Reaction fo...")
(Created page with "Category:reaction == Reaction RXN-13698 == * direction: ** reversible * common-name: ** alanine transaminase * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.2 ec-2.6.1....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction HOLOCYTOCHROME-C-SYNTHASE-RXN ==
+
== Reaction RXN-13698 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 +
* common-name:
 +
** alanine transaminase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.4.1.17 ec-4.4.1.17]
+
** [http://enzyme.expasy.org/EC/2.6.1.2 ec-2.6.1.2]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Cytochromes-c]][c] '''<=>''' 1 [[Apocytochromes-c]][c] '''+''' 1 [[HEME_C]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ20234]]
+
* Gene: [[SJ19809]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ00174]]
+
* Gene: [[SJ06815]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR115964
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22651 22651]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02480 R02480]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P06182 P06182]
 
** [http://www.uniprot.org/uniprot/P14187 P14187]
 
** [http://www.uniprot.org/uniprot/O25044 O25044]
 
** [http://www.uniprot.org/uniprot/O83139 O83139]
 
** [http://www.uniprot.org/uniprot/P45706 P45706]
 
** [http://www.uniprot.org/uniprot/Q9ZMH0 Q9ZMH0]
 
** [http://www.uniprot.org/uniprot/P44202 P44202]
 
** [http://www.uniprot.org/uniprot/P53701 P53701]
 
** [http://www.uniprot.org/uniprot/Q00873 Q00873]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: ec-number=ec-4.4.1.17}}
+
{{#set: common-name=alanine transaminase}}
 +
{{#set: ec-number=ec-2.6.1.2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-13698

  • direction:
    • reversible
  • common-name:
    • alanine transaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links