Difference between revisions of "RXN-13712"

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(Created page with "Category:reaction == Reaction RXN-7658 == * direction: ** reversible * common-name: ** geranylgeranyl diphosphate reductase == Reaction formula == * 1 CPD-7002[c] '''+...")
(Created page with "Category:reaction == Reaction RXN-13712 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.18.9 ec-1.14.18.9] == Reaction formula == * 1 ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-7658 ==
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== Reaction RXN-13712 ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
* common-name:
+
* ec-number:
** geranylgeranyl diphosphate reductase
+
** [http://enzyme.expasy.org/EC/1.14.18.9 ec-1.14.18.9]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-7002]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[44-DIMETHYL-824-CHOLESTADIENOL]][c] '''+''' 6 [[FERROCYTOCHROME-B5]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 5 [[PROTON]][c] '''=>''' 1 [[CPD-4577]][c] '''+''' 6 [[FERRICYTOCHROME-B5]][c] '''+''' 4 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ15264]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5063]], phytyl diphosphate biosynthesis:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR112253
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* METANETX-RXN : MNXR118263
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R08754 R08754]
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** [http://www.genome.jp/dbget-bin/www_bget?R07509 R07509]
{{#set: direction=reversible}}
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* RHEA:
{{#set: common-name=geranylgeranyl diphosphate reductase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33444 33444]
{{#set: nb gene associated=1}}
+
{{#set: direction=left-to-right}}
{{#set: nb pathway associated=1}}
+
{{#set: ec-number=ec-1.14.18.9}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}
 +
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-13712

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR118263
  • LIGAND-RXN:
  • RHEA: