Difference between revisions of "RXN-13712-44-DIMETHYL-824-CHOLESTADIENOL/NADH/OXYGEN-MOLECULE/PROTON//CPD-4577/NAD/WATER.79."

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(Created page with "Category:reaction == Reaction 1.1.1.39-RXN == * direction: ** left-to-right * common-name: ** malate dehydrogenase (decarboxylating) (nad+) ** oxaloacetate decarboxylase *...")
(Created page with "Category:reaction == Reaction RXN-13712-44-DIMETHYL-824-CHOLESTADIENOL/NADH/OXYGEN-MOLECULE/PROTON//CPD-4577/NAD/WATER.79. == * direction: ** left-to-right == Reaction for...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.1.1.39-RXN ==
+
== Reaction RXN-13712-44-DIMETHYL-824-CHOLESTADIENOL/NADH/OXYGEN-MOLECULE/PROTON//CPD-4577/NAD/WATER.79. ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** malate dehydrogenase (decarboxylating) (nad+)
 
−
** oxaloacetate decarboxylase
 
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** malate dehydrogenase, nad-requiring
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38]
 
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** [http://enzyme.expasy.org/EC/1.1.1.39 ec-1.1.1.39]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1.0 [[44-DIMETHYL-824-CHOLESTADIENOL]][c] '''+''' 3.0 [[NADH]][c] '''+''' 3.0 [[OXYGEN-MOLECULE]][c] '''+''' 2.0 [[PROTON]][c] '''=>''' 1.0 [[CPD-4577]][c] '''+''' 3.0 [[NAD]][c] '''+''' 4.0 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ14191]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ13180]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ11643]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7118]], chitin degradation to ethanol:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]], gluconeogenesis I:
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 
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** '''9''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-7686]], L-malate degradation II:
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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* [[PWY-3641]], L-carnitine degradation III:
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12654 12654]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q48662 Q48662]
 
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** [http://www.uniprot.org/uniprot/Q9PN12 Q9PN12]
 
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** [http://www.uniprot.org/uniprot/O59029 O59029]
 
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** [http://www.uniprot.org/uniprot/P16468 P16468]
 
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** [http://www.uniprot.org/uniprot/Q9CGB2 Q9CGB2]
 
−
** [http://www.uniprot.org/uniprot/P26616 P26616]
 
−
** [http://www.uniprot.org/uniprot/Q9JVE6 Q9JVE6]
 
−
** [http://www.uniprot.org/uniprot/P37224 P37224]
 
−
** [http://www.uniprot.org/uniprot/P37225 P37225]
 
−
** [http://www.uniprot.org/uniprot/P37221 P37221]
 
−
** [http://www.uniprot.org/uniprot/Q7M1T9 Q7M1T9]
 
−
** [http://www.uniprot.org/uniprot/Q9M162 Q9M162]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00214 R00214]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=malate dehydrogenase (decarboxylating) (nad+)|oxaloacetate decarboxylase|malate dehydrogenase, nad-requiring}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-1.1.1.39|ec-1.1.1.38}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=3}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: nb pathway associated=6}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:22, 18 March 2021

Reaction RXN-13712-44-DIMETHYL-824-CHOLESTADIENOL/NADH/OXYGEN-MOLECULE/PROTON//CPD-4577/NAD/WATER.79.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-13712-44-DIMETHYL-824-CHOLESTADIENOL/NADH/OXYGEN-MOLECULE/PROTON//CPD-4577/NAD/WATER.79.&oldid=142025"