Difference between revisions of "RXN-14025"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-374 PWY66-374] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-40674 tax...")
 
(Created page with "Category:reaction == Reaction RXN-14025 == * direction: ** left-to-right * common-name: ** ump phosphatase ** 5'-nucleotidase * ec-number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-374 PWY66-374] ==
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== Reaction RXN-14025 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-40674 tax-40674]
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** left-to-right
 
* common-name:
 
* common-name:
** c20 prostanoid biosynthesis
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** ump phosphatase
== Reaction(s) found ==
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** 5'-nucleotidase
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
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* ec-number:
* [[PROSTAGLANDIN-E-SYNTHASE-RXN]]
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** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
== Reaction(s) not found ==
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== Reaction formula ==
* [http://metacyc.org/META/NEW-IMAGE?object=PROSTAGLANDIN-ENDOPEROXIDE-SYNTHASE-RXN PROSTAGLANDIN-ENDOPEROXIDE-SYNTHASE-RXN]
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* 1 [[UMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c]
* [http://metacyc.org/META/NEW-IMAGE?object=PROSTAGLANDIN-I-SYNTHASE-RXN PROSTAGLANDIN-I-SYNTHASE-RXN]
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== Gene(s) associated with this reaction  ==
* [http://metacyc.org/META/NEW-IMAGE?object=THROMBOXANE-A-SYNTHASE-RXN THROMBOXANE-A-SYNTHASE-RXN]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
{{#set: taxonomic-range=tax-40674}}
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* Gene: [[SJ15366]]
{{#set: common-name=c20 prostanoid biosynthesis}}
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** Category: [[annotation]]
{{#set: nb reaction found=2}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
{{#set: completion rate=0.4}}
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** Category: [[orthology]]
{{#set: nb total reaction=5}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ18895]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ16098]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ09030]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ18402]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-7821]], tunicamycin biosynthesis:
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7185]], UTP and CTP dephosphorylation I:
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
 +
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00963 R00963]
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* METANETX-RXN : MNXR102032
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29360 29360]
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{{#set: direction=left-to-right}}
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{{#set: common-name=ump phosphatase|5'-nucleotidase}}
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{{#set: ec-number=ec-3.1.3.5}}
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{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-14025

  • direction:
    • left-to-right
  • common-name:
    • ump phosphatase
    • 5'-nucleotidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7821, tunicamycin biosynthesis:
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-7185, UTP and CTP dephosphorylation I:
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR102032
  • RHEA: