Difference between revisions of "RXN-14120"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN] == * direction: ** left-to...")
 
(Created page with "Category:reaction == Reaction RXN-14120 == * direction: ** reversible * common-name: ** nucleoside diphosphate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.6...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN] ==
+
== Reaction RXN-14120 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** acyl-[acp]:1-acyl-sn-glycerol-3-phosphate 2-o-acyltransferase
+
** nucleoside diphosphate kinase
−
** 1-acylglycerol-3-phosphate o-acyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACYL-ACP]][c] '''+''' 1 [[ACYL-SN-GLYCEROL-3P]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[IDP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[ITP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[SJ20565]]
+
* Gene: [[SJ20794]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13801]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ20076]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10647]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ01857]]
+
* Gene: [[SJ21816]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08159]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ13643]]
+
* Gene: [[SJ10125]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ15136]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16893]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ09888]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ18009]]
+
* Gene: [[SJ21705]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ13501]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ08831]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07124]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21967]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5981]], CDP-diacylglycerol biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5981 PWY-5981]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR101941
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42297 42297]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30350 30350]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09381 R09381]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00722 R00722]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9JU41 Q9JU41]
+
{{#set: common-name=nucleoside diphosphate kinase}}
−
** [http://www.uniprot.org/uniprot/Q9XDL6 Q9XDL6]
+
{{#set: ec-number=ec-2.7.4.6}}
−
** [http://www.uniprot.org/uniprot/P0A257 P0A257]
+
{{#set: nb gene associated=9}}
−
** [http://www.uniprot.org/uniprot/O07809 O07809]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q9ZD75 Q9ZD75]
 
−
** [http://www.uniprot.org/uniprot/Q9ZJN8 Q9ZJN8]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7Y4 Q9Z7Y4]
 
−
** [http://www.uniprot.org/uniprot/O07808 O07808]
 
−
** [http://www.uniprot.org/uniprot/Q9KP63 Q9KP63]
 
−
** [http://www.uniprot.org/uniprot/P44848 P44848]
 
−
** [http://www.uniprot.org/uniprot/Q49402 Q49402]
 
−
** [http://www.uniprot.org/uniprot/O25903 O25903]
 
−
** [http://www.uniprot.org/uniprot/O07807 O07807]
 
−
** [http://www.uniprot.org/uniprot/O07584 O07584]
 
−
** [http://www.uniprot.org/uniprot/Q59188 Q59188]
 
−
** [http://www.uniprot.org/uniprot/Q9PHZ5 Q9PHZ5]
 
−
** [http://www.uniprot.org/uniprot/O53516 O53516]
 
−
** [http://www.uniprot.org/uniprot/O84459 O84459]
 
−
** [http://www.uniprot.org/uniprot/Q9RRA7 Q9RRA7]
 
−
** [http://www.uniprot.org/uniprot/O35083 O35083]
 
−
** [http://www.uniprot.org/uniprot/P26647 P26647]
 
−
** [http://www.uniprot.org/uniprot/Q42870 Q42870]
 
−
** [http://www.uniprot.org/uniprot/Q59618 Q59618]
 
−
** [http://www.uniprot.org/uniprot/Q59601 Q59601]
 
−
** [http://www.uniprot.org/uniprot/P75479 P75479]
 
−
** [http://www.uniprot.org/uniprot/P74498 P74498]
 
−
** [http://www.uniprot.org/uniprot/Q93841 Q93841]
 
−
** [http://www.uniprot.org/uniprot/Q22267 Q22267]
 
−
** [http://www.uniprot.org/uniprot/Q9S2M2 Q9S2M2]
 
−
** [http://www.uniprot.org/uniprot/Q9ZBS1 Q9ZBS1]
 
−
** [http://www.uniprot.org/uniprot/Q9US20 Q9US20]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=1-acylglycerol-3-phosphate o-acyltransferase|acyl-[acp]:1-acyl-sn-glycerol-3-phosphate 2-o-acyltransferase}}
 
−
{{#set: ec-number=ec-2.3.1.51}}
 
−
{{#set: nb gene associated=10}}
 
−
{{#set: nb pathway associated=2}}
 
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-14120

  • direction:
    • reversible
  • common-name:
    • nucleoside diphosphate kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR101941
  • RHEA:
  • LIGAND-RXN:





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