Difference between revisions of "RXN-14139"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10727 RXN-10727] == * direction: ** left-to-right * common-name: ** myristoyl-acp hydrolase act...")
(Created page with "Category:reaction == Reaction RXN-14139 == * direction: ** left-to-right * common-name: ** nucleotide diphosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.9 ec...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10727 RXN-10727] ==
+
== Reaction RXN-14139 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** myristoyl-acp hydrolase activity
+
** nucleotide diphosphatase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.2.14 ec-3.1.2.14]
+
** [http://enzyme.expasy.org/EC/3.6.1.9 ec-3.6.1.9]
* synonymous:
 
** tetradecanoyl-acp hydrolase activity
 
** tetradecanoyl-[acyl-carrier-protein] hydrolase activity
 
** myristoyl-[acyl-carrier protein] hydrolase activity
 
** myristoyl-acp hydrolase activity
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CPD-7836]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[UTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ07337]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19894]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08998]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ12166]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ22529]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19893]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08856]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04934]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7821]], tunicamycin biosynthesis:
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR102055
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00662 R00662]
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30126 30126]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29398 29398]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R08159 R08159]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=myristoyl-acp hydrolase activity}}
+
{{#set: common-name=nucleotide diphosphatase}}
{{#set: ec-number=ec-3.1.2.14}}
+
{{#set: ec-number=ec-3.6.1.9}}
{{#set: synonymous=tetradecanoyl-[acyl-carrier-protein] hydrolase activity|myristoyl-[acyl-carrier protein] hydrolase activity|tetradecanoyl-acp hydrolase activity|myristoyl-acp hydrolase activity}}
+
{{#set: nb gene associated=8}}
{{#set: nb gene associated=0}}
+
{{#set: nb pathway associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
 

Latest revision as of 11:19, 18 March 2021

Reaction RXN-14139

  • direction:
    • left-to-right
  • common-name:
    • nucleotide diphosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7821, tunicamycin biosynthesis:
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR102055
  • LIGAND-RXN:
  • RHEA: