Difference between revisions of "RXN-14286"

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(Created page with "Category:reaction == Reaction ASPARAGHYD-RXN == * direction: ** left-to-right * common-name: ** asparaginase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.38 ec-3.5.1...")
(Created page with "Category:reaction == Reaction PSII-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.10.3.9 ec-1.10.3.9] == Reaction formula == * 1 Lig...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ASPARAGHYD-RXN ==
+
== Reaction PSII-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** asparaginase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.38 ec-3.5.1.38]
+
** [http://enzyme.expasy.org/EC/1.10.3.9 ec-1.10.3.9]
−
** [http://enzyme.expasy.org/EC/3.5.1.1 ec-3.5.1.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ASN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ASPARTATE]][c]
+
* 1 [[Light]][c] '''+''' 2 [[PLASTOQUINONE]][c] '''+''' 4 [[PROTON]][e] '''+''' 2 [[WATER]][c] '''=>''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 4 [[PROTON]][c] '''+''' 2 [[Plastoquinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17531]]
+
* Gene: [[SJ10606]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09511]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian):
+
* [[PWY-101]], photosynthesis light reactions:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[ASPASN-PWY]], superpathway of L-aspartate and L-asparagine biosynthesis:
 
−
** '''4''' reactions found over '''2''' reactions in the full pathway
 
−
* [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21017 21017]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00485 R00485]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P06608 P06608]
 
−
** [http://www.uniprot.org/uniprot/P26900 P26900]
 
−
** [http://www.uniprot.org/uniprot/P43843 P43843]
 
−
** [http://www.uniprot.org/uniprot/Q9V262 Q9V262]
 
−
** [http://www.uniprot.org/uniprot/Q9JT73 Q9JT73]
 
−
** [http://www.uniprot.org/uniprot/O25424 O25424]
 
−
** [http://www.uniprot.org/uniprot/P37595 P37595]
 
−
** [http://www.uniprot.org/uniprot/Q9ZLB9 Q9ZLB9]
 
−
** [http://www.uniprot.org/uniprot/O34482 O34482]
 
−
** [http://www.uniprot.org/uniprot/Q9V2K1 Q9V2K1]
 
−
** [http://www.uniprot.org/uniprot/O57797 O57797]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ82 Q9PJ82]
 
−
** [http://www.uniprot.org/uniprot/P30363 P30363]
 
−
** [http://www.uniprot.org/uniprot/P30362 P30362]
 
−
** [http://www.uniprot.org/uniprot/P30364 P30364]
 
−
** [http://www.uniprot.org/uniprot/P38986 P38986]
 
−
** [http://www.uniprot.org/uniprot/P50287 P50287]
 
−
** [http://www.uniprot.org/uniprot/P11163 P11163]
 
−
** [http://www.uniprot.org/uniprot/P50286 P50286]
 
−
** [http://www.uniprot.org/uniprot/P87015 P87015]
 
−
** [http://www.uniprot.org/uniprot/Q9UTS7 Q9UTS7]
 
−
** [http://www.uniprot.org/uniprot/P00805 P00805]
 
−
** [http://www.uniprot.org/uniprot/P0A962 P0A962]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=asparaginase}}
+
{{#set: ec-number=ec-1.10.3.9}}
−
{{#set: ec-number=ec-3.5.1.1|ec-3.5.1.38}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:18, 14 January 2021

Reaction PSII-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-101, photosynthesis light reactions:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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