Difference between revisions of "RXN-14539"

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(Created page with "Category:reaction == Reaction DIOHBUTANONEPSYN-RXN == * direction: ** left-to-right * common-name: ** 3,4-dihydroxy-2-butanone-4-phosphate synthase * ec-number: ** [http:/...")
(Created page with "Category:reaction == Reaction RXN-15212 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.12 ec-3.1.4.12] == Reaction formula == * 1 N-...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction DIOHBUTANONEPSYN-RXN ==
+
== Reaction RXN-15212 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** 3,4-dihydroxy-2-butanone-4-phosphate synthase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.99.12 ec-4.1.99.12]
+
** [http://enzyme.expasy.org/EC/3.1.4.12 ec-3.1.4.12]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[RIBULOSE-5P]][c] '''=>''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[N-acyl-sphingosylphosphorylcholine]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-Acylsphingosine]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17329]]
+
* Gene: [[SJ16608]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16609]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
+
* [[PWY3DJ-11281]], sphingomyelin metabolism:
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-6167]], flavin biosynthesis II (archaea):
+
* [[PWY-7277]], sphingolipid biosynthesis (mammals):
** '''5''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''3''' reactions in the full pathway
* [[PWY-6168]], flavin biosynthesis III (fungi):
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18458 18458]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07281 R07281]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3,4-dihydroxy-2-butanone-4-phosphate synthase}}
+
{{#set: ec-number=ec-3.1.4.12}}
{{#set: ec-number=ec-4.1.99.12}}
+
{{#set: nb gene associated=2}}
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=2}}
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:18, 14 January 2021

Reaction RXN-15212

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3DJ-11281, sphingomyelin metabolism:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7277, sphingolipid biosynthesis (mammals):
    • 4 reactions found over 3 reactions in the full pathway

Reconstruction information

External links