Difference between revisions of "RXN-14772"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]...")
(Created page with "Category:reaction == Reaction RXN0-2381 == * direction: ** reversible * common-name: ** indoleglycerol phosphate aldolase * ec-number: ** [http://enzyme.expasy.org/EC/4.1....")
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN] ==
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== Reaction RXN0-2381 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
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** reversible
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
 
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
 
 
* common-name:
 
* common-name:
** l-tyrosine biosynthesis i
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** indoleglycerol phosphate aldolase
== Reaction(s) found ==
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* ec-number:
* [[CHORISMATEMUT-RXN]]
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** [http://enzyme.expasy.org/EC/4.1.2.8 ec-4.1.2.8]
* [[PREPHENATEDEHYDROG-RXN]]
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== Reaction formula ==
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
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* 1 [[INDOLE-3-GLYCEROL-P]][c] '''<=>''' 1 [[GAP]][c] '''+''' 1 [[INDOLE]][c]
== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
All reactions of this pathways are in present
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* Gene: [[SJ16706]]
{{#set: taxonomic-range=tax-2157|tax-4751|tax-33090|tax-2}}
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** Category: [[orthology]]
{{#set: common-name=l-tyrosine biosynthesis i}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
{{#set: nb reaction found=3}}
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* Gene: [[SJ15468]]
{{#set: completion rate=1.0}}
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** Category: [[orthology]]
{{#set: nb total reaction=3}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10955]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ20325]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ09991]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-6949]], DIBOA-glucoside biosynthesis:
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02340 R02340]
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14084 14084]
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{{#set: direction=reversible}}
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{{#set: common-name=indoleglycerol phosphate aldolase}}
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{{#set: ec-number=ec-4.1.2.8}}
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{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina}}

Revision as of 20:45, 18 December 2020

Reaction RXN0-2381

  • direction:
    • reversible
  • common-name:
    • indoleglycerol phosphate aldolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6949, DIBOA-glucoside biosynthesis:
    • 1 reactions found over 6 reactions in the full pathway
  • TRPSYN-PWY, L-tryptophan biosynthesis:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links