Difference between revisions of "RXN-15511"

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(Created page with "Category:reaction == Reaction GLUTDEHYD-RXN == * direction: ** reversible * common-name: ** glutamate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.4 ec...")
(Created page with "Category:reaction == Reaction RXN-15511 == * direction: ** reversible == Reaction formula == * 1 23-DIPHOSPHOGLYCERATE[c] '''+''' 1 Protein-Histidines[c] '''<=>'''...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction GLUTDEHYD-RXN ==
+
== Reaction RXN-15511 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
* common-name:
 
** glutamate dehydrogenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.4.1.4 ec-1.4.1.4]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GLT]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[23-DIPHOSPHOGLYCERATE]][c] '''+''' 1 [[Protein-Histidines]][c] '''<=>''' 1 [[G3P]][c] '''+''' 1 [[Protein-pi-phospho-L-histidines]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10621]]
+
* Gene: [[SJ09590]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
+
* Gene: [[SJ15529]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ20190]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ10812]]
+
* Gene: [[SJ21685]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ10813]]
+
* Gene: [[SJ12497]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ20174]]
+
* Gene: [[SJ13678]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14916]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III:
+
* [[PWY-6405]], Rapoport-Luebering glycolytic shunt:
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-5675]], nitrate reduction V (assimilatory):
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY490-3]], nitrate reduction VI (assimilatory):
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11615 11615]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P07262 P07262]
 
** [http://www.uniprot.org/uniprot/P15111 P15111]
 
** [http://www.uniprot.org/uniprot/P28724 P28724]
 
** [http://www.uniprot.org/uniprot/P43793 P43793]
 
** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
 
** [http://www.uniprot.org/uniprot/P00370 P00370]
 
** [http://www.uniprot.org/uniprot/P00369 P00369]
 
** [http://www.uniprot.org/uniprot/P29507 P29507]
 
** [http://www.uniprot.org/uniprot/P28998 P28998]
 
** [http://www.uniprot.org/uniprot/P29051 P29051]
 
** [http://www.uniprot.org/uniprot/P31026 P31026]
 
** [http://www.uniprot.org/uniprot/P39475 P39475]
 
** [http://www.uniprot.org/uniprot/P39708 P39708]
 
** [http://www.uniprot.org/uniprot/P54387 P54387]
 
** [http://www.uniprot.org/uniprot/P54386 P54386]
 
** [http://www.uniprot.org/uniprot/P95544 P95544]
 
** [http://www.uniprot.org/uniprot/P78804 P78804]
 
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=glutamate dehydrogenase}}
+
{{#set: nb gene associated=6}}
{{#set: ec-number=ec-1.4.1.4}}
+
{{#set: nb pathway associated=1}}
{{#set: nb gene associated=5}}
+
{{#set: reconstruction category=annotation}}
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-15511

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6405, Rapoport-Luebering glycolytic shunt:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links