Difference between revisions of "RXN-15684"
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(Created page with "Category:reaction == Reaction THFOR1 == * direction: ** left-to-right * common-name: ** 5,6,7,8-tetrahydrofolate:nad+ oxidoreductase == Reaction formula == * 1.0 CPD-128...") |
(Created page with "Category:reaction == Reaction RXN-13322 == * direction: ** left-to-right * common-name: ** 3-oxo-(11z)-eicos-11-enoyl-coa synthase * ec-number: ** [http://enzyme.expasy.or...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-13322 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** 3-oxo-(11z)-eicos-11-enoyl-coa synthase |
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.3.1.199 ec-2.3.1.199] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 | + | * 1 [[MALONYL-COA]][c] '''+''' 1 [[OLEOYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14300]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ19629]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ06616]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ11672]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ00613]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6433]], hydroxylated fatty acid biosynthesis (plants): | ||
| + | ** '''17''' reactions found over '''22''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=3-oxo-(11z)-eicos-11-enoyl-coa synthase}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-2.3.1.199}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=4}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction category=annotation|orthology}} |
| + | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:21, 15 January 2021
Contents
Reaction RXN-13322
- direction:
- left-to-right
- common-name:
- 3-oxo-(11z)-eicos-11-enoyl-coa synthase
- ec-number:
Reaction formula
- 1 MALONYL-COA[c] + 1 OLEOYL-COA[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 CO-A[c] + 1 CPD-14300[c]
Gene(s) associated with this reaction
- Gene: SJ19629
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ06616
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ11672
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ00613
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6433, hydroxylated fatty acid biosynthesis (plants):
- 17 reactions found over 22 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
