Difference between revisions of "RXN-16261"

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(Created page with "Category:reaction == Reaction RXN-1126 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.12 ec-6.2.1.12] == Reaction formula == * 1 ATP...")
(Created page with "Category:reaction == Reaction RXN-12392 == * direction: ** left-to-right * common-name: ** phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1] =...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-1126 ==
+
== Reaction RXN-12392 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** phosphorylase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.2.1.12 ec-6.2.1.12]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-676]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[Linear-Malto-Oligosaccharides]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[GLC-1-P]][c] '''+''' 1 [[Linear-Malto-Oligosaccharides]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ03066]]
+
* Gene: [[SJ18078]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[SJ16901]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7398]], coumarins biosynthesis (engineered):
 
** '''3''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-6673]], caffeoylglucarate biosynthesis:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-1121]], suberin monomers biosynthesis:
 
** '''9''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36300 36300]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01943 R01943]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-6.2.1.12}}
+
{{#set: common-name=phosphorylase}}
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-2.4.1.1}}
{{#set: nb pathway associated=3}}
+
{{#set: nb gene associated=1}}
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:38, 5 January 2021

Reaction RXN-12392

  • direction:
    • left-to-right
  • common-name:
    • phosphorylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links