Difference between revisions of "RXN-17573"

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(Created page with "Category:reaction == Reaction 2.8.1.6-RXN == * direction: ** left-to-right * common-name: ** biotin synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1.6 ec-2.8.1....")
(Created page with "Category:reaction == Reaction RXN-17573 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.58 ec-2.5.1.58] == Reaction formula == * 1 CA...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.8.1.6-RXN ==
+
== Reaction RXN-17573 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** biotin synthase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.8.1.6 ec-2.8.1.6]
+
** [http://enzyme.expasy.org/EC/2.5.1.58 ec-2.5.1.58]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DETHIOBIOTIN]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 1 [[BIOTIN]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c]
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* 1 [[CAAX-proteins]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[Farnesylated-CAAX-proteins]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16348]]
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* Gene: [[SJ06255]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17982]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II:
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR121006
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22061 22061]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7]
 
** [http://www.uniprot.org/uniprot/Q9PLZ3 Q9PLZ3]
 
** [http://www.uniprot.org/uniprot/P53557 P53557]
 
** [http://www.uniprot.org/uniprot/O67104 O67104]
 
** [http://www.uniprot.org/uniprot/P44987 P44987]
 
** [http://www.uniprot.org/uniprot/Q58692 Q58692]
 
** [http://www.uniprot.org/uniprot/P0A506 P0A506]
 
** [http://www.uniprot.org/uniprot/Q9Z6L5 Q9Z6L5]
 
** [http://www.uniprot.org/uniprot/Q9JUE3 Q9JUE3]
 
** [http://www.uniprot.org/uniprot/P46396 P46396]
 
** [http://www.uniprot.org/uniprot/Q47862 Q47862]
 
** [http://www.uniprot.org/uniprot/P19206 P19206]
 
** [http://www.uniprot.org/uniprot/P32451 P32451]
 
** [http://www.uniprot.org/uniprot/P54967 P54967]
 
** [http://www.uniprot.org/uniprot/P46715 P46715]
 
** [http://www.uniprot.org/uniprot/P73538 P73538]
 
** [http://www.uniprot.org/uniprot/P12996 P12996]
 
** [http://www.uniprot.org/uniprot/O59778 O59778]
 
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=biotin synthase}}
+
{{#set: ec-number=ec-2.5.1.58}}
{{#set: ec-number=ec-2.8.1.6}}
+
{{#set: nb gene associated=2}}
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction category=annotation|orthology}}
 
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-17573

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR121006