Difference between revisions of "RXN-21830"

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(Created page with "Category:reaction == Reaction HOMOCYSMETB12-RXN == * direction: ** left-to-right * common-name: ** methionine synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.1...")
(Created page with "Category:reaction == Reaction RXN-21830 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.418 ec-1.1.1.418] * direction: ** left-to-right == Reaction formula == * 1 ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction HOMOCYSMETB12-RXN ==
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== Reaction RXN-21830 ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.418 ec-1.1.1.418]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
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* common-name:
 
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** methionine synthase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[HOMO-CYS]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[CPD-23708]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-23709]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ03226]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
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* [[PWY-8191]], cholesterol biosynthesis (algae, late side-chain reductase):
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** '''4''' reactions found over '''7''' reactions in the full pathway
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** '''11''' reactions found over '''19''' reactions in the full pathway
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* [[HSERMETANA-PWY]], L-methionine biosynthesis III:
 
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** '''3''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-3841]], folate transformations II (plants):
 
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** '''9''' reactions found over '''11''' reactions in the full pathway
 
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* [[1CMET2-PWY]], folate transformations III (E. coli):
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine:
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-2201]], folate transformations I:
 
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** '''9''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[reactions_add_sjap]]; tool: [[curation]]; comment: curation sterols (girard et al.)
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: ec-number=ec-1.1.1.418}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11173 11173]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q57195 Q57195]
 
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** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6]
 
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** [http://www.uniprot.org/uniprot/O33259 O33259]
 
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** [http://www.uniprot.org/uniprot/Q55786 Q55786]
 
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** [http://www.uniprot.org/uniprot/Q09582 Q09582]
 
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** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4]
 
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** [http://www.uniprot.org/uniprot/P13009 P13009]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=methionine synthase}}
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{{#set: nb gene associated=0}}
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{{#set: ec-number=ec-2.1.1.13}}
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{{#set: nb pathway associated=1}}
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{{#set: nb gene associated=1}}
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{{#set: reconstruction category=manual}}
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{{#set: nb pathway associated=6}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction comment=curation sterols (girard et al.)}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction source=reactions_add_sjap}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:18, 18 March 2021

Reaction RXN-21830

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-8191, cholesterol biosynthesis (algae, late side-chain reductase):
    • 11 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-21830&oldid=139954"