Difference between revisions of "RXN-3443"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6444 PWY-6444] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-31...")
 
(Created page with "Category:reaction == Reaction RXN-3443 == * direction: ** left-to-right * common-name: ** aldehyde dehydrogenase (nad) ** nad+-dependent glyceraldehyde-3-phosphate dehydro...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6444 PWY-6444] ==
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== Reaction RXN-3443 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-3193]
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** left-to-right
 
* common-name:
 
* common-name:
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** benzoate biosynthesis ii (coa-independent, non-β-oxidative)
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** aldehyde dehydrogenase (nad)
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== Reaction(s) found ==
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** nad+-dependent glyceraldehyde-3-phosphate dehydrogenase
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* [[BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN]]
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* ec-number:
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11270 RXN-11270]
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11269 RXN-11269]
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* 1 [[GAP]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[G3P]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-AMMONIA-LYASE-RXN PHENYLALANINE-AMMONIA-LYASE-RXN]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-3193}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=benzoate biosynthesis ii (coa-independent, non-&beta;-oxidative)}}
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* Gene: [[SJ09287]]
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{{#set: nb reaction found=1}}
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** Category: [[annotation]]
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{{#set: completion rate=0.25}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: nb total reaction=4}}
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* Gene: [[SJ00435]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06047]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06456]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ22552]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ10107]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ05897]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06470]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ11331]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ11330]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06359]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ17249]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative):
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R10860 R10860]
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* METANETX-RXN : MNXR114174
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42761 42761]
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{{#set: direction=left-to-right}}
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{{#set: common-name=nad+-dependent glyceraldehyde-3-phosphate dehydrogenase|aldehyde dehydrogenase (nad)}}
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{{#set: ec-number=ec-1.2.1.3}}
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{{#set: nb gene associated=12}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-3443

  • direction:
    • left-to-right
  • common-name:
    • aldehyde dehydrogenase (nad)
    • nad+-dependent glyceraldehyde-3-phosphate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2221, Entner-Doudoroff pathway III (semi-phosphorylative):
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR114174
  • RHEA:





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