Difference between revisions of "RXN-5471"

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(Created page with "Category:reaction == Reaction 2.4.1.119-RXN == * direction: ** left-to-right * common-name: ** dolichyl-diphosphooligosaccharide-protein glycotransferase ** dolichyl-dipho...")
(Created page with "Category:reaction == Reaction RXN-7979 == * direction: ** left-to-right * synonymous: ** zea-epoxidase == Reaction formula == * 1 CPD1F-131[c] '''+''' 1 OXYGEN-MOLEC...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.4.1.119-RXN ==
+
== Reaction RXN-7979 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
+
* synonymous:
−
** dolichyl-diphosphooligosaccharide-protein glycotransferase
+
** zea-epoxidase
−
** dolichyl-diphospho-oligosaccharide-protein glycosyltransferase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.4.99.18 ec-2.4.99.18]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-18076]][c] '''+''' 1 [[Protein-L-Asparagine]][c] '''=>''' 1 [[CPD-18077]][c] '''+''' 1 [[CPD-224]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD1F-131]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-133]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ1973]]
−
* Gene: [[SJ08534]]
+
** Category: [[manual]]
−
** Category: [[annotation]]
+
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04308]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18586]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19404]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ12004]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02055]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
+
* [[PWY-5174]], capsanthin and capsorubin biosynthesis:
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR110671
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50349 50349]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14938 14938]
−
* UNIPROT:
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P39656 P39656]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07200 R07200]
−
** [http://www.uniprot.org/uniprot/P48440 P48440]
 
−
** [http://www.uniprot.org/uniprot/P41543 P41543]
 
−
** [http://www.uniprot.org/uniprot/P80896 P80896]
 
−
** [http://www.uniprot.org/uniprot/P80897 P80897]
 
−
** [http://www.uniprot.org/uniprot/P48439 P48439]
 
−
** [http://www.uniprot.org/uniprot/P46964 P46964]
 
−
** [http://www.uniprot.org/uniprot/Q92316 Q92316]
 
−
** [http://www.uniprot.org/uniprot/Q10176 Q10176]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dolichyl-diphosphooligosaccharide-protein glycotransferase|dolichyl-diphospho-oligosaccharide-protein glycosyltransferase}}
+
{{#set: synonymous=zea-epoxidase}}
−
{{#set: ec-number=ec-2.4.99.18}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction comment=transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=sjap}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 08:40, 15 March 2021

Reaction RXN-7979

  • direction:
    • left-to-right
  • synonymous:
    • zea-epoxidase

Reaction formula

Gene(s) associated with this reaction

  • Gene: SJ1973
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

Pathway(s)

  • PWY-5174, capsanthin and capsorubin biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5945, violaxanthin, antheraxanthin and zeaxanthin interconversion:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

  • category: manual; source: sjap; tool: curation; comment: transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)

External links

  • METANETX-RXN : MNXR110671
  • RHEA:
  • LIGAND-RXN:





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