Difference between revisions of "RXN-5471"

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(Created page with "Category:reaction == Reaction RXN1F-19 == * direction: ** left-to-right * common-name: ** allene oxide synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.92 ec-4....")
(Created page with "Category:reaction == Reaction PHOSPHATIDYLCHOLINE-DESATURASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.19.22 ec-1.14.19.22] ==...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN1F-19 ==
+
== Reaction PHOSPHATIDYLCHOLINE-DESATURASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** allene oxide synthase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.92 ec-4.2.1.92]
+
** [http://enzyme.expasy.org/EC/1.14.19.22 ec-1.14.19.22]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-725]][c] '''=>''' 1 [[CPD-728]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[1-ACYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOCHOL]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[1-ACYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOC]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07592]]
+
* Gene: [[SJ00667]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ03285]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20926]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05390]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05110]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ01682]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-735]], jasmonic acid biosynthesis:
 
** '''16''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25075 25075]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12564 12564]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R07863 R07863]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03475 R03475]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P20388 P20388]
 +
** [http://www.uniprot.org/uniprot/Q55230 Q55230]
 +
** [http://www.uniprot.org/uniprot/Q55231 Q55231]
 +
** [http://www.uniprot.org/uniprot/Q44503 Q44503]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=allene oxide synthase}}
+
{{#set: ec-number=ec-1.14.19.22}}
{{#set: ec-number=ec-4.2.1.92}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=6}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:08, 5 January 2021

Reaction PHOSPHATIDYLCHOLINE-DESATURASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links