Difference between revisions of "RXN-6383"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16622 RXN-16622] == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-pro...")
(Created page with "Category:reaction == Reaction RXN-6383 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.116 ec-4.2.1.116] == Reaction formula == * 1 3-HY...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16622 RXN-16622] ==
+
== Reaction RXN-6383 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
−
** (7z)-3-oxo-hexadec-7-enoyl-[acp] reductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/4.2.1.116 ec-4.2.1.116]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[7Z-3-oxo-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-7Z-3-hydroxy-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''<=>''' 1 [[ACRYLYL-COA]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17743]]
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* Gene: [[SJ21390]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ13014]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00040]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03913]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ04229]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
+
* [[PWY-3941]], &beta;-alanine biosynthesis II:
−
** '''13''' reactions found over '''14''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5744]], glyoxylate assimilation:
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7574]], propanoyl-CoA degradation II:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* METANETX-RXN : MNXR100691
−
{{#set: common-name=(7z)-3-oxo-hexadec-7-enoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
+
* RHEA:
−
{{#set: ec-number=ec-1.1.1.100}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26518 26518]
−
{{#set: nb gene associated=3}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03045 R03045]
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: direction=reversible}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: ec-number=ec-4.2.1.116}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=5}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-6383

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3941, β-alanine biosynthesis II:
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5744, glyoxylate assimilation:
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-7574, propanoyl-CoA degradation II:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle:
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
    • 8 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100691
  • RHEA:
  • LIGAND-RXN:





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