Difference between revisions of "RXN-6763"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction ARGSUCCINSYN-RXN == * direction: ** left-to-right * common-name: ** argininosuccinate synthase * ec-number: ** [http://enzyme.expasy.org/EC/6...")
(Created page with "Category:reaction == Reaction RXN-6763 == * direction: ** left-to-right * common-name: ** cysteine conjugate β-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.4....")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ARGSUCCINSYN-RXN ==
+
== Reaction RXN-6763 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** argininosuccinate synthase
+
** cysteine conjugate β-lyase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.4.5 ec-6.3.4.5]
+
** [http://enzyme.expasy.org/EC/4.4.1.13 ec-4.4.1.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[L-CITRULLINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[S-Substituted-L-Cysteines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Thiols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10377]]
+
* Gene: [[SJ03867]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaea):
+
* [[PWY-4061]], glutathione-mediated detoxification I:
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-4984]], urea cycle:
+
* [[PWY-6842]], glutathione-mediated detoxification II:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR121876
−
* METANETX-RXN : MNXR138060
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18122 18122]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q08415 Q08415]
 +
** [http://www.uniprot.org/uniprot/Q16773 Q16773]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03528 R03528]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P22768 P22768]
 
−
** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4]
 
−
** [http://www.uniprot.org/uniprot/P00966 P00966]
 
−
** [http://www.uniprot.org/uniprot/P16460 P16460]
 
−
** [http://www.uniprot.org/uniprot/P13256 P13256]
 
−
** [http://www.uniprot.org/uniprot/P13257 P13257]
 
−
** [http://www.uniprot.org/uniprot/P09034 P09034]
 
−
** [http://www.uniprot.org/uniprot/P24532 P24532]
 
−
** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7]
 
−
** [http://www.uniprot.org/uniprot/P57799 P57799]
 
−
** [http://www.uniprot.org/uniprot/Q60174 Q60174]
 
−
** [http://www.uniprot.org/uniprot/P44315 P44315]
 
−
** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1]
 
−
** [http://www.uniprot.org/uniprot/P50986 P50986]
 
−
** [http://www.uniprot.org/uniprot/Q06734 Q06734]
 
−
** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1]
 
−
** [http://www.uniprot.org/uniprot/Q59491 Q59491]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=argininosuccinate synthase}}
+
{{#set: common-name=cysteine conjugate &beta;-lyase}}
−
{{#set: ec-number=ec-6.3.4.5}}
+
{{#set: ec-number=ec-4.4.1.13}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-6763

  • direction:
    • left-to-right
  • common-name:
    • cysteine conjugate β-lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4061, glutathione-mediated detoxification I:
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-6842, glutathione-mediated detoxification II:
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-6763&oldid=143125"