Difference between revisions of "RXN-6763"

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(Created page with "Category:reaction == Reaction L-ASPARTATE-OXID-RXN == * direction: ** left-to-right * common-name: ** l-aspartate oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4....")
(Created page with "Category:reaction == Reaction RXN-6763 == * direction: ** left-to-right * common-name: ** cysteine conjugate β-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.4....")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction L-ASPARTATE-OXID-RXN ==
+
== Reaction RXN-6763 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** l-aspartate oxidase
+
** cysteine conjugate β-lyase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.3.16 ec-1.4.3.16]
+
** [http://enzyme.expasy.org/EC/4.4.1.13 ec-4.4.1.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-ASPARTATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[IMINOASPARTATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[S-Substituted-L-Cysteines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Thiols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19480]]
+
* Gene: [[SJ03867]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate):
+
* [[PWY-4061]], glutathione-mediated detoxification I:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5316]], nicotine biosynthesis:
+
* [[PWY-6842]], glutathione-mediated detoxification II:
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7342]], superpathway of nicotine biosynthesis:
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR121876
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25877 25877]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18122 18122]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q08415 Q08415]
 +
** [http://www.uniprot.org/uniprot/Q16773 Q16773]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00481 R00481]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03528 R03528]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-aspartate oxidase}}
+
{{#set: common-name=cysteine conjugate β-lyase}}
−
{{#set: ec-number=ec-1.4.3.16}}
+
{{#set: ec-number=ec-4.4.1.13}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-6763

  • direction:
    • left-to-right
  • common-name:
    • cysteine conjugate β-lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4061, glutathione-mediated detoxification I:
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-6842, glutathione-mediated detoxification II:
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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