Difference between revisions of "RXN-698"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MDUMT MDUMT] == * direction: ** reversible * common-name: ** 5,10-methylenetetrahydrofolate:dump c-...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17252 RXN-17252] == * direction: ** left-to-right * common-name: ** pheophorbide a oxygenase ==...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MDUMT MDUMT] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17252 RXN-17252] ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** 5,10-methylenetetrahydrofolate:dump c-methyltransferase
+
** pheophorbide a oxygenase
 
== Reaction formula ==
 
== Reaction formula ==
* 1.0 [[DUMP]][c] '''+''' 1.0 [[METHYLENE-THF]][c] '''<=>''' 1.0 [[DIHYDROFOLATE]][c] '''+''' 1.0 [[TMP]][c]
+
* 1 [[CPD-7061]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD-18666]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19601]]
+
* Gene: [[SJ00278]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22309]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17313]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22311]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08869]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07178]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6927]], chlorophyll a degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6927 PWY-6927]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5098]], chlorophyll a degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5098 PWY-5098]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
{{#set: direction=reversible}}
+
* RHEA:
{{#set: common-name=5,10-methylenetetrahydrofolate:dump c-methyltransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48161 48161]
{{#set: nb gene associated=1}}
+
{{#set: direction=left-to-right}}
{{#set: nb pathway associated=0}}
+
{{#set: common-name=pheophorbide a oxygenase}}
{{#set: reconstruction category=orthology}}
+
{{#set: nb gene associated=6}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction RXN-17252

  • direction:
    • left-to-right
  • common-name:
    • pheophorbide a oxygenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6927, chlorophyll a degradation II: PWY-6927
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5098, chlorophyll a degradation I: PWY-5098
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links