Difference between revisions of "RXN-7913"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-A1-RXN PHOSPHOLIPASE-A1-RXN] == * direction: ** left-to-right * common-name: ** phosp...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10778 RXN-10778] == * direction: ** left-to-right * common-name: ** serotonin oxidase * ec-numb...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-A1-RXN PHOSPHOLIPASE-A1-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10778 RXN-10778] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** phosphatidylcholine 1-acylhydrolase
+
** serotonin oxidase
** 1-lysophosphatidylcholine acylhydrolase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.1.32 ec-3.1.1.32]
+
** [http://enzyme.expasy.org/EC/1.4.3.4 ec-1.4.3.4]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[PHOSPHATIDYLCHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-Acylglycero-Phosphocholines]][c] '''+''' 1 [[Fatty-Acids]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[SEROTONIN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ02841]]
+
* Gene: [[SJ07831]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21874]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ01382]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ14819]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ22570]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[LIPASYN-PWY]], phospholipases: [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
+
* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
* [[PWY-6803]], phosphatidylcholine acyl editing: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6803 PWY-6803]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18690 18690]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01314 R01314]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02908 R02908]
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P53357 P53357]
 
** [http://www.uniprot.org/uniprot/P51528 P51528]
 
** [http://www.uniprot.org/uniprot/Q9PMU8 Q9PMU8]
 
** [http://www.uniprot.org/uniprot/P0A921 P0A921]
 
** [http://www.uniprot.org/uniprot/P18952 P18952]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=phosphatidylcholine 1-acylhydrolase|1-lysophosphatidylcholine acylhydrolase}}
+
{{#set: common-name=serotonin oxidase}}
{{#set: ec-number=ec-3.1.1.32}}
+
{{#set: ec-number=ec-1.4.3.4}}
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction RXN-10778

  • direction:
    • left-to-right
  • common-name:
    • serotonin oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6313, serotonin degradation: PWY-6313
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links