Difference between revisions of "RXN-7979"

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(Created page with "Category:reaction == Reaction L-ASPARTATE-OXID-RXN == * direction: ** left-to-right * common-name: ** l-aspartate oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4....")
(Created page with "Category:reaction == Reaction RXN-7979 == * direction: ** left-to-right * synonymous: ** zea-epoxidase == Reaction formula == * 1 CPD1F-131[c] '''+''' 1 OXYGEN-MOLEC...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction L-ASPARTATE-OXID-RXN ==
+
== Reaction RXN-7979 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
+
* synonymous:
** l-aspartate oxidase
+
** zea-epoxidase
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.4.3.16 ec-1.4.3.16]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[L-ASPARTATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[IMINOASPARTATE]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[CPD1F-131]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-133]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19480]]
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* Gene: [[SJ1973]]
** Category: [[annotation]]
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** Category: [[manual]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate):
+
* [[PWY-5174]], capsanthin and capsorubin biosynthesis:
** '''6''' reactions found over '''6''' reactions in the full pathway
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** '''1''' reactions found over '''3''' reactions in the full pathway
* [[PWY-5316]], nicotine biosynthesis:
+
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion:
** '''3''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7342]], superpathway of nicotine biosynthesis:
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR110671
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25877 25877]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14938 14938]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00481 R00481]
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** [http://www.genome.jp/dbget-bin/www_bget?R07200 R07200]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=l-aspartate oxidase}}
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{{#set: synonymous=zea-epoxidase}}
{{#set: ec-number=ec-1.4.3.16}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=3}}
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{{#set: nb pathway associated=2}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=sjap}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-7979

  • direction:
    • left-to-right
  • synonymous:
    • zea-epoxidase

Reaction formula

Gene(s) associated with this reaction

  • Gene: SJ1973
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

Pathway(s)

  • PWY-5174, capsanthin and capsorubin biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5945, violaxanthin, antheraxanthin and zeaxanthin interconversion:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

  • category: manual; source: sjap; tool: curation; comment: transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)

External links

  • METANETX-RXN : MNXR110671
  • RHEA:
  • LIGAND-RXN: