Difference between revisions of "RXN-8317"

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(Created page with "Category:reaction == Reaction HISTALDEHYD-RXN == * direction: ** left-to-right * common-name: ** histidinal dehydrogenase ** histidinol dehydrogenase == Reaction formula =...")
(Created page with "Category:reaction == Reaction RXN-9242 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201] == Reaction formula == * 1 C...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction HISTALDEHYD-RXN ==
+
== Reaction RXN-9242 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
+
* ec-number:
** histidinal dehydrogenase
+
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
** histidinol dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[HISTIDINAL]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HIS]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[CPD-9870]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9872]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07444]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ20751]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02842]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00609]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11757]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ18961]]
+
* Gene: [[SJ07072]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
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* Gene: [[SJ02693]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
* Gene: [[SJ10107]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
+
* Gene: [[SJ11297]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[HISTSYN-PWY]], L-histidine biosynthesis:
+
* [[PWY-5871]], ubiquinol-9 biosynthesis (late decarboxylation):
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5856]], ubiquinol-9 biosynthesis (early decarboxylation):
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR122735
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33804 33804]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44761 44761]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01163 R01163]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P24226 P24226]
 
** [http://www.uniprot.org/uniprot/P44001 P44001]
 
** [http://www.uniprot.org/uniprot/O34651 O34651]
 
** [http://www.uniprot.org/uniprot/P63950 P63950]
 
** [http://www.uniprot.org/uniprot/Q9RSI4 Q9RSI4]
 
** [http://www.uniprot.org/uniprot/Q02136 Q02136]
 
** [http://www.uniprot.org/uniprot/Q9JTH9 Q9JTH9]
 
** [http://www.uniprot.org/uniprot/O30027 O30027]
 
** [http://www.uniprot.org/uniprot/Q9PM77 Q9PM77]
 
** [http://www.uniprot.org/uniprot/P10370 P10370]
 
** [http://www.uniprot.org/uniprot/P06988 P06988]
 
** [http://www.uniprot.org/uniprot/O66976 O66976]
 
** [http://www.uniprot.org/uniprot/Q58851 Q58851]
 
** [http://www.uniprot.org/uniprot/O26327 O26327]
 
** [http://www.uniprot.org/uniprot/Q9X0D1 Q9X0D1]
 
** [http://www.uniprot.org/uniprot/P18786 P18786]
 
** [http://www.uniprot.org/uniprot/P28736 P28736]
 
** [http://www.uniprot.org/uniprot/P45353 P45353]
 
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 
** [http://www.uniprot.org/uniprot/P72946 P72946]
 
** [http://www.uniprot.org/uniprot/P73058 P73058]
 
** [http://www.uniprot.org/uniprot/P00815 P00815]
 
** [http://www.uniprot.org/uniprot/P07685 P07685]
 
** [http://www.uniprot.org/uniprot/P16245 P16245]
 
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=histidinal dehydrogenase|histidinol dehydrogenase}}
+
{{#set: ec-number=ec-2.1.1.201}}
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=7}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:37, 15 March 2021

Reaction RXN-9242

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5871, ubiquinol-9 biosynthesis (late decarboxylation):
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5856, ubiquinol-9 biosynthesis (early decarboxylation):
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122735
  • RHEA: