Difference between revisions of "RXN-8320"

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(Created page with "Category:reaction == Reaction PYRUFLAVREDUCT-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.2.7.1 ec-1.2.7.1] == Reaction formula == * 1...")
(Created page with "Category:reaction == Reaction RXN-8320 == * direction: ** left-to-right * common-name: ** 1-18:1-2-18:1-sn-glycerol-3-phosphocholine 1-12-desaturase * ec-number: ** [http:...")
 
(3 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PYRUFLAVREDUCT-RXN ==
+
== Reaction RXN-8320 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** 1-18:1-2-18:1-sn-glycerol-3-phosphocholine 1-12-desaturase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.7.1 ec-1.2.7.1]
+
** [http://enzyme.expasy.org/EC/1.14.19.22 ec-1.14.19.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[PYRUVATE]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c]
+
* 1 [[CPD-2181]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-8088]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19470]]
+
* Gene: [[SJ00667]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ09312]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15200]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-762]], phospholipid desaturation:
−
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative):
+
** '''19''' reactions found over '''21''' reactions in the full pathway
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5493]], reductive monocarboxylic acid cycle:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered):
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6587]], pyruvate fermentation to ethanol III:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6588]], pyruvate fermentation to acetone:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[PWY-6583]], pyruvate fermentation to butanol I:
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5483]], pyruvate fermentation to acetate III:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[CENTFERM-PWY]], pyruvate fermentation to butanoate:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P42-PWY]], incomplete reductive TCA cycle:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5392]], reductive TCA cycle II:
 
−
** '''6''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P142-PWY]], pyruvate fermentation to acetate I:
 
−
** '''2''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate):
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum):
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5538]], pyruvate fermentation to acetate VI:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P23-PWY]], reductive TCA cycle I:
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6876]], isopropanol biosynthesis (engineered):
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5600]], pyruvate fermentation to acetate VII:
 
−
** '''2''' reactions found over '''1''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR122256
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12768 12768]
+
{{#set: common-name=1-18:1-2-18:1-sn-glycerol-3-phosphocholine 1-12-desaturase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.14.19.22}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01196 R01196]
+
{{#set: nb gene associated=1}}
−
* UNIPROT:
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q57957 Q57957]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/O28574 O28574]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q56316 Q56316]
 
−
** [http://www.uniprot.org/uniprot/Q9R503 Q9R503]
 
−
** [http://www.uniprot.org/uniprot/Q57714 Q57714]
 
−
** [http://www.uniprot.org/uniprot/O05651 O05651]
 
−
** [http://www.uniprot.org/uniprot/Q57715 Q57715]
 
−
** [http://www.uniprot.org/uniprot/O27771 O27771]
 
−
** [http://www.uniprot.org/uniprot/O28572 O28572]
 
−
** [http://www.uniprot.org/uniprot/Q56317 Q56317]
 
−
** [http://www.uniprot.org/uniprot/Q9UWL2 Q9UWL2]
 
−
** [http://www.uniprot.org/uniprot/P56810 P56810]
 
−
** [http://www.uniprot.org/uniprot/O28571 O28571]
 
−
** [http://www.uniprot.org/uniprot/Q9UWL1 Q9UWL1]
 
−
** [http://www.uniprot.org/uniprot/Q57717 Q57717]
 
−
** [http://www.uniprot.org/uniprot/O25312 O25312]
 
−
** [http://www.uniprot.org/uniprot/O25738 O25738]
 
−
** [http://www.uniprot.org/uniprot/O25739 O25739]
 
−
** [http://www.uniprot.org/uniprot/O58411 O58411]
 
−
** [http://www.uniprot.org/uniprot/Q9UYZ4 Q9UYZ4]
 
−
** [http://www.uniprot.org/uniprot/Q9UYZ3 Q9UYZ3]
 
−
** [http://www.uniprot.org/uniprot/Q59455 Q59455]
 
−
** [http://www.uniprot.org/uniprot/Q59456 Q59456]
 
−
** [http://www.uniprot.org/uniprot/P80521 P80521]
 
−
** [http://www.uniprot.org/uniprot/P80522 P80522]
 
−
** [http://www.uniprot.org/uniprot/P80523 P80523]
 
−
** [http://www.uniprot.org/uniprot/P80524 P80524]
 
−
** [http://www.uniprot.org/uniprot/P95903 P95903]
 
−
** [http://www.uniprot.org/uniprot/P95904 P95904]
 
−
** [http://www.uniprot.org/uniprot/Q51799 Q51799]
 
−
** [http://www.uniprot.org/uniprot/Q51800 Q51800]
 
−
** [http://www.uniprot.org/uniprot/Q51802 Q51802]
 
−
** [http://www.uniprot.org/uniprot/Q51803 Q51803]
 
−
** [http://www.uniprot.org/uniprot/Q51804 Q51804]
 
−
** [http://www.uniprot.org/uniprot/Q51805 Q51805]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: ec-number=ec-1.2.7.1}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=18}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-8320

  • direction:
    • left-to-right
  • common-name:
    • 1-18:1-2-18:1-sn-glycerol-3-phosphocholine 1-12-desaturase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-762, phospholipid desaturation:
    • 19 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122256





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