Difference between revisions of "RXN-8368"

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(Created page with "Category:reaction == Reaction RXN3O-54 == * direction: ** left-to-right * common-name: ** 2-hexaprenyl-6-methoxy-1,4-benzoquinol methyltransferase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction 2.5.1.58-RXN == * direction: ** reversible * common-name: ** farnesyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.58 ec-2.5...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN3O-54 ==
+
== Reaction 2.5.1.58-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** 2-hexaprenyl-6-methoxy-1,4-benzoquinol methyltransferase
+
** farnesyltransferase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
+
** [http://enzyme.expasy.org/EC/2.5.1.58 ec-2.5.1.58]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-HEXAPRENYL-6-METHOXY-14-BENZOQUINOL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[2-HEXAPRENYL-3-METHYL-6-METHOXY-14-BENZ]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[FARNESYL-PP]][c] '''+''' 1 [[PROT-CYS]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[Protein-S-farnesyl-L-cysteines]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ06255]]
* Gene: [[SJ07072]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ00609]]
+
* Gene: [[SJ17982]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ02842]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ11757]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20751]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02693]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ11297]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7230]], ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast):
 
** '''3''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7233]], ubiquinol-6 bypass biosynthesis (eukaryotic):
 
** '''3''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic):
 
** '''4''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: direction=reversible}}
** [http://www.genome.jp/dbget-bin/www_bget?R04990 R04990]
+
{{#set: common-name=farnesyltransferase}}
* RHEA:
+
{{#set: ec-number=ec-2.5.1.58}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28286 28286]
+
{{#set: nb gene associated=2}}
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=0}}
{{#set: common-name=2-hexaprenyl-6-methoxy-1,4-benzoquinol methyltransferase}}
+
{{#set: reconstruction category=annotation|orthology}}
{{#set: ec-number=ec-2.1.1.201}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
{{#set: nb gene associated=7}}
 
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:28, 15 January 2021

Reaction 2.5.1.58-RXN

  • direction:
    • reversible
  • common-name:
    • farnesyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links