Difference between revisions of "RXN-8642"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-336 RXN66-336] == * direction: ** left-to-right * common-name: ** leukotriene-c4 gamma-glutam...")
(Created page with "Category:reaction == Reaction RXN-8642 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** reversible * common-name:...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-336 RXN66-336] ==
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== Reaction RXN-8642 ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* direction:
 
* direction:
** left-to-right
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** reversible
 
* common-name:
 
* common-name:
** leukotriene-c4 gamma-glutamyl transferase
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** nadp-dependent isocitrate dehydrogenase
** ltc4 &gamma;-glutamyl transferase
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* synonymous:
* ec-number:
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** dual-cofactor-specific isocitrate dehydrogenase
** [http://enzyme.expasy.org/EC/2.3.2.2 ec-2.3.2.2]
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** idp1
 +
** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 +
** idp
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** oxalsuccinic decarboxylase
 +
** isocitrate dehydrogenase (nadp-dependent)
 +
** nadp-dependent isocitric dehydrogenase
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** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 +
** nadp+-icdh
 +
** idp2
 +
** idp3
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** idh (ambiguous)
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** nadp-specific isocitrate dehydrogenase
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** nadp+-idh
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** nadp+-linked isocitrate dehydrogenase
 +
** nadp-linked isocitrate dehydrogenase
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** isocitrate (nadp) dehydrogenase
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** nadp isocitric dehydrogenase
 +
</div>
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Amino-Acids-20]][c] '''+''' 1 [[LEUKOTRIENE-C4]][c] '''=>''' 1 [[5-L-GLUTAMYL-L-AMINO-ACID]][c] '''+''' 1 [[CPD66-21]][c]
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* 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ08598]]
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* Gene: [[SJ08749]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08599]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY66-375]], leukotriene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-375 PWY66-375]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: direction=left-to-right}}
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* METANETX-RXN : MNXR105305
{{#set: common-name=leukotriene-c4 gamma-glutamyl transferase|ltc4 &gamma;-glutamyl transferase}}
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* RHEA:
{{#set: ec-number=ec-2.3.2.2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384]
{{#set: nb gene associated=2}}
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* LIGAND-RXN:
{{#set: nb pathway associated=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268]
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{{#set: direction=reversible}}
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{{#set: common-name=nadp-dependent isocitrate dehydrogenase}}
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{{#set: synonymous=dual-cofactor-specific isocitrate dehydrogenase|idp2|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|idp|nadp-dependent isocitric dehydrogenase|oxalsuccinic decarboxylase|idh (ambiguous)|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|isocitrate (nadp) dehydrogenase|nadp-linked isocitrate dehydrogenase|nadp+-icdh|nadp+-linked isocitrate dehydrogenase|nadp isocitric dehydrogenase|idp3|nadp+-idh|nadp-specific isocitrate dehydrogenase|isocitrate dehydrogenase (nadp-dependent)|idp1}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-8642

  • direction:
    • reversible
  • common-name:
    • nadp-dependent isocitrate dehydrogenase
  • synonymous:
    • dual-cofactor-specific isocitrate dehydrogenase
    • idp1
    • triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
    • idp
    • oxalsuccinic decarboxylase
    • isocitrate dehydrogenase (nadp-dependent)
    • nadp-dependent isocitric dehydrogenase
    • isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
    • nadp+-icdh
    • idp2
    • idp3
    • idh (ambiguous)
    • nadp-specific isocitrate dehydrogenase
    • nadp+-idh
    • nadp+-linked isocitrate dehydrogenase
    • nadp-linked isocitrate dehydrogenase
    • isocitrate (nadp) dehydrogenase
    • nadp isocitric dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR105305
  • RHEA:
  • LIGAND-RXN: