Difference between revisions of "RXN-9229"

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(Created page with "Category:reaction == Reaction 2.5.1.58-RXN == * direction: ** reversible * common-name: ** farnesyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.58 ec-2.5...")
(Created page with "Category:reaction == Reaction RXN-9229 == * direction: ** left-to-right * common-name: ** 3-demethylubiquinone-7 3-o-methyltransferase * ec-number: ** [http://enzyme.expas...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.5.1.58-RXN ==
+
== Reaction RXN-9229 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** farnesyltransferase
+
** 3-demethylubiquinone-7 3-o-methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.58 ec-2.5.1.58]
+
** [http://enzyme.expasy.org/EC/2.1.1.64 ec-2.1.1.64]
 +
* synonymous:
 +
** 5-demethylubiquinone-7 methyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[FARNESYL-PP]][c] '''+''' 1 [[PROT-CYS]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[Protein-S-farnesyl-L-cysteines]][c]
+
* 1 [[CPD-9861]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9955]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06255]]
+
* Gene: [[SJ16864]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ17982]]
+
* Gene: [[SJ13007]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5855]], ubiquinol-7 biosynthesis (early decarboxylation):
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5873]], ubiquinol-7 biosynthesis (late decarboxylation):
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR122721
−
{{#set: common-name=farnesyltransferase}}
+
* RHEA:
−
{{#set: ec-number=ec-2.5.1.58}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44405 44405]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=3-demethylubiquinone-7 3-o-methyltransferase}}
 +
{{#set: ec-number=ec-2.1.1.64}}
 +
{{#set: synonymous=5-demethylubiquinone-7 methyltransferase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-9229

  • direction:
    • left-to-right
  • common-name:
    • 3-demethylubiquinone-7 3-o-methyltransferase
  • ec-number:
  • synonymous:
    • 5-demethylubiquinone-7 methyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5855, ubiquinol-7 biosynthesis (early decarboxylation):
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5873, ubiquinol-7 biosynthesis (late decarboxylation):
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122721
  • RHEA:






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