Difference between revisions of "RXN-9548"

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(Created page with "Category:reaction == Reaction RXN-14073 == * direction: ** left-to-right * common-name: ** glycerophosphoglycerol phosphodiesterase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction RXN-9548 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.14 ec-3.1.2.14] == Reaction formula == * 1 Ste...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-14073 ==
+
== Reaction RXN-9548 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** glycerophosphoglycerol phosphodiesterase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/3.1.2.14 ec-3.1.2.14]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GLYCEROPHOSPHOGLYCEROL]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Stearoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[STEARIC_ACID]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16458]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ00999]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
* LIGAND-RXN:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29910 29910]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08163 R08163]
 +
* METANETX-RXN : MNXR111740
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=glycerophosphoglycerol phosphodiesterase}}
+
{{#set: ec-number=ec-3.1.2.14}}
{{#set: ec-number=ec-3.1.4.46}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:24, 18 March 2021

Reaction RXN-9548

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5989, stearate biosynthesis II (bacteria and plants):
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR111740