Difference between revisions of "RXN-9548"

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(Created page with "Category:reaction == Reaction RXN-14073 == * direction: ** left-to-right * common-name: ** glycerophosphoglycerol phosphodiesterase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction PPENTOMUT-RXN == * direction: ** reversible * common-name: ** α-d-ribose 1,5-phosphomutase * ec-number: ** [http://enzyme.expasy.org/EC...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-14073 ==
+
== Reaction PPENTOMUT-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** glycerophosphoglycerol phosphodiesterase
+
** α-d-ribose 1,5-phosphomutase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/5.4.2.7 ec-5.4.2.7]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GLYCEROPHOSPHOGLYCEROL]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[RIBOSE-1P]][c] '''<=>''' 1 [[RIBOSE-5P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16458]]
+
* Gene: [[SJ05004]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ00999]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-661]]:
 +
** '''1''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY0-1296]], purine ribonucleosides degradation:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29910 29910]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18796 18796]
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
{{#set: common-name=glycerophosphoglycerol phosphodiesterase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01057 R01057]
{{#set: ec-number=ec-3.1.4.46}}
+
* UNIPROT:
{{#set: nb gene associated=2}}
+
** [http://www.uniprot.org/uniprot/Q9CH12 Q9CH12]
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/O24821 O24821]
{{#set: reconstruction category=annotation|orthology}}
+
** [http://www.uniprot.org/uniprot/P0A6K6 P0A6K6]
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: direction=reversible}}
 +
{{#set: common-name=&alpha;-d-ribose 1,5-phosphomutase}}
 +
{{#set: ec-number=ec-5.4.2.7}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:07, 5 January 2021

Reaction PPENTOMUT-RXN

  • direction:
    • reversible
  • common-name:
    • α-d-ribose 1,5-phosphomutase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-661:
    • 1 reactions found over n.a reactions in the full pathway
  • PWY0-1296, purine ribonucleosides degradation:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links