Difference between revisions of "RXN-9772"

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(Created page with "Category:reaction == Reaction RXN1F-151 == * direction: ** left-to-right * common-name: ** γ-carotene β-cyclase * ec-number: ** [http://enzyme.expasy.org/EC/5.5...")
(Created page with "Category:reaction == Reaction RXN-9772 == * direction: ** left-to-right * common-name: ** l-aspartate : fumarate oxidoreductase (deaminating) ** l-aspartate oxidase * ec-n...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN1F-151 ==
+
== Reaction RXN-9772 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** γ-carotene β-cyclase
+
** l-aspartate : fumarate oxidoreductase (deaminating)
 +
** l-aspartate oxidase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/5.5.1.19 ec-5.5.1.19]
+
** [http://enzyme.expasy.org/EC/1.5.99 ec-1.5.99]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD1F-126]][c] '''=>''' 1 [[CPD1F-129]][c]
+
* 1 [[FUM]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[IMINOASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ04962]]
+
* Gene: [[SJ19480]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7938]], isorenieratene biosynthesis I (actinobacteria):
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5943]], β-carotene biosynthesis:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR96093
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32242 32242]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30044 30044]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03824 R03824]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=γ-carotene β-cyclase}}
+
{{#set: common-name=l-aspartate : fumarate oxidoreductase (deaminating)|l-aspartate oxidase}}
{{#set: ec-number=ec-5.5.1.19}}
+
{{#set: ec-number=ec-1.5.99}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-9772

  • direction:
    • left-to-right
  • common-name:
    • l-aspartate : fumarate oxidoreductase (deaminating)
    • l-aspartate oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR96093
  • RHEA: