Difference between revisions of "RXN-9969"

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(Created page with "Category:reaction == Reaction MONOPHENOL-MONOOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** tyrosinase * ec-number: ** [http://enzyme.expasy.org/EC/1.14....")
(Created page with "Category:reaction == Reaction RXN0-1134 == * direction: ** left-to-right * common-name: ** pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidored...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction MONOPHENOL-MONOOXYGENASE-RXN ==
+
== Reaction RXN0-1134 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** tyrosinase
+
** pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase
 +
** pyruvate dehydrogenase (nad+)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.18.1 ec-1.14.18.1]
+
** [http://enzyme.expasy.org/EC/1.2.4.1 ec-1.2.4.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[DOPAQUINONE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10614]]
+
* Gene: [[SJ09312]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ06533]]
+
* Gene: [[SJ00971]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14925]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ06532]]
+
* Gene: [[SJ01042]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19470]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ04618]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18841]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7917]], pheomelanin biosynthesis:
+
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA:
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6481]], L-dopa and L-dopachrome biosynthesis:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18118 18118]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02078 R02078]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P06845 P06845]
+
** [http://www.uniprot.org/uniprot/P06959 P06959]
−
** [http://www.uniprot.org/uniprot/P33180 P33180]
+
** [http://www.uniprot.org/uniprot/P26267 P26267]
−
** [http://www.uniprot.org/uniprot/P07524 P07524]
+
** [http://www.uniprot.org/uniprot/P35485 P35485]
−
** [http://www.uniprot.org/uniprot/Q04604 Q04604]
+
** [http://www.uniprot.org/uniprot/Q59097 Q59097]
−
** [http://www.uniprot.org/uniprot/P55024 P55024]
+
** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
−
** [http://www.uniprot.org/uniprot/Q00234 Q00234]
+
** [http://www.uniprot.org/uniprot/P45119 P45119]
−
** [http://www.uniprot.org/uniprot/P14679 P14679]
+
** [http://www.uniprot.org/uniprot/P11966 P11966]
−
** [http://www.uniprot.org/uniprot/P11344 P11344]
+
** [http://www.uniprot.org/uniprot/P35488 P35488]
−
** [http://www.uniprot.org/uniprot/Q91XK0 Q91XK0]
+
** [http://www.uniprot.org/uniprot/P47515 P47515]
 +
** [http://www.uniprot.org/uniprot/P21882 P21882]
 +
** [http://www.uniprot.org/uniprot/P47516 P47516]
 +
** [http://www.uniprot.org/uniprot/P21881 P21881]
 +
** [http://www.uniprot.org/uniprot/P21873 P21873]
 +
** [http://www.uniprot.org/uniprot/P16387 P16387]
 +
** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
 +
** [http://www.uniprot.org/uniprot/P08559 P08559]
 +
** [http://www.uniprot.org/uniprot/P11177 P11177]
 +
** [http://www.uniprot.org/uniprot/P29803 P29803]
 +
** [http://www.uniprot.org/uniprot/P29804 P29804]
 +
** [http://www.uniprot.org/uniprot/P26284 P26284]
 +
** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
 +
** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
 +
** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
 +
** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
 +
** [http://www.uniprot.org/uniprot/Q09171 Q09171]
 +
** [http://www.uniprot.org/uniprot/P52901 P52901]
 +
** [http://www.uniprot.org/uniprot/P79931 P79931]
 +
** [http://www.uniprot.org/uniprot/P79932 P79932]
 +
** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
 +
** [http://www.uniprot.org/uniprot/P10801 P10801]
 +
** [http://www.uniprot.org/uniprot/P21874 P21874]
 +
** [http://www.uniprot.org/uniprot/P49432 P49432]
 +
** [http://www.uniprot.org/uniprot/Q59820 Q59820]
 +
** [http://www.uniprot.org/uniprot/P35486 P35486]
 +
** [http://www.uniprot.org/uniprot/P35487 P35487]
 +
** [http://www.uniprot.org/uniprot/Q06437 Q06437]
 +
** [http://www.uniprot.org/uniprot/P32473 P32473]
 +
** [http://www.uniprot.org/uniprot/Q59107 Q59107]
 +
** [http://www.uniprot.org/uniprot/P73405 P73405]
 +
** [http://www.uniprot.org/uniprot/Q49109 Q49109]
 +
** [http://www.uniprot.org/uniprot/O48685 O48685]
 +
** [http://www.uniprot.org/uniprot/P52902 P52902]
 +
** [http://www.uniprot.org/uniprot/P52904 P52904]
 +
** [http://www.uniprot.org/uniprot/P52903 P52903]
 +
** [http://www.uniprot.org/uniprot/O66112 O66112]
 +
** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
 +
** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
 +
** [http://www.uniprot.org/uniprot/O69478 O69478]
 +
** [http://www.uniprot.org/uniprot/P10802 P10802]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tyrosinase}}
+
{{#set: common-name=pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase|pyruvate dehydrogenase (nad+)}}
−
{{#set: ec-number=ec-1.14.18.1}}
+
{{#set: ec-number=ec-1.2.4.1}}
 
{{#set: nb gene associated=5}}
 
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:19, 14 January 2021

Reaction RXN0-1134

  • direction:
    • left-to-right
  • common-name:
    • pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase
    • pyruvate dehydrogenase (nad+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PYRUVDEHYD-PWY, pyruvate decarboxylation to acetyl CoA:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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