Difference between revisions of "RXN0-5181"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NADH-DEHYDROGENASE-QUINONE-RXN NADH-DEHYDROGENASE-QUINONE-RXN] == * direction: ** left-to-right * c...")
(Created page with "Category:reaction == Reaction R05819 == * direction: ** reversible * common-name: ** phycoerythrobilin:ferredoxin oxidoreductase == Reaction formula == * 1.0 1516-DIHYDR...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NADH-DEHYDROGENASE-QUINONE-RXN NADH-DEHYDROGENASE-QUINONE-RXN] ==
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== Reaction R05819 ==
 
* direction:
 
* direction:
** left-to-right
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** reversible
 
* common-name:
 
* common-name:
** nadh dehydrogenase (quinone)
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** phycoerythrobilin:ferredoxin oxidoreductase
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.6.5.11 ec-1.6.5.11]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-3766]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MENADIOL]][c] '''+''' 1 [[NAD]][c]
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* 1.0 [[1516-DIHYDROBILIVERDIN]][h] '''+''' 1.0 [[Reduced-ferredoxins]][h] '''<=>''' 1.0 [[3Z-PHYCOERYTHROBILIN]][h] '''+''' 1.0 [[Oxidized-ferredoxins]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ04581]]
* Gene: [[SJ15310]]
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** Category: [[orthology]]
** Category: [[annotation]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ16410]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ14995]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ05715]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ10422]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21017]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21333]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ19412]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ02471]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ09960]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ22333]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: direction=reversible}}
** [http://www.genome.jp/dbget-bin/www_bget?R02964 R02964]
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{{#set: common-name=phycoerythrobilin:ferredoxin oxidoreductase}}
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=1}}
{{#set: common-name=nadh dehydrogenase (quinone)}}
 
{{#set: ec-number=ec-1.6.5.11}}
 
{{#set: nb gene associated=11}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 20:39, 18 December 2020

Reaction R05819

  • direction:
    • reversible
  • common-name:
    • phycoerythrobilin:ferredoxin oxidoreductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links